Phragmites australis (common reed): 133915656
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Entry
133915656 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133915656
KO
K20222
importin-5
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133915656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133915656
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
133915656
Pre-60S particles
133915656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_4
Importin_rep_6
HEAT
TOR1L1_N
HEAT_2
HEAT_EF3_N
MMS19_C
Vac14_Fab1_bd
Arm
Cnd1
Htt_N-HEAT_1
TPR_TNPO3_IPO13_3rd
HEAT_Maestro
Adaptin_N
DNA_alkylation
RTP1_C1
ARM_ECM29_C
MIF4G
Motif
Other DBs
NCBI-GeneID:
133915656
NCBI-ProteinID:
XP_062214877
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All DBs
Position
4:complement(10388895..10400612)
Genome browser
AA seq
1110 aa
AA seq
DB search
MDPQAEADAAAVLGADPAALMALLAELTSPANEARSRAERQFHGLRGSHPDALALSLAHL
LLSPAHPSAPIAAVLLRRLIAPSSQSFCYPALSPASQSSLRALLLSAASAPALHRSVSKK
LSDAVAELASFLLPNNAWPDLLTFLYKSIASPSSPPALQESALNILARLASHLAAGFPNL
HALLLSALSHPSSADVRVAGLNAAISLIQSLPSAADRDQFQDLLPAMMRALAESLNCGNE
GSAQEALEMMIELAGAEPRFLRRQLPDVVASMLQIAEAPGLEDGTRHLAVEFVVTLAEAR
DRAPGMMRKLPRYVGRLFAVLMTMLLDVQDEPAWHAAVSEEEDAGETGSYVFAQECLDRL
AIAVGGNTILPVAAELLPSFFASEEWKRRHAALVTIAQIAEGSAKVMIKNLEQVVGMVLN
SFQDPHPRVRWAAINAVGQLSTDLGPELQNQLHHVVVPALASAMDDFQNPRVQAHAASAI
LNFSENCRPDILTLYLDGIVGRLLQLLQTGNQMVQEAALTALASAADSSQEHFQKYYDAV
MPYLKAILMNATDKSSRMLRAKSMECISLVGMAVGKQKFKDDAKQVMEVLMKLQGSQMEA
DDPITSYMFQAWARLCKCLGQDFLPYMSVVMPPLLQSAQLKPDVSVTSAGSEENGESDDE
GVETITLGDKRIGIRTSLLEEKATACNMLCCYADELKEGFFPWIDQVATTLVPLLKFYFH
EEVRKAAVSAMPELLLSAKLAVEKGQAQGRDNSYRKHLSDYIVPALIEAMNKEPEPQICA
SILESLNECIQLSGTHLEEGQVRAIVDGIKEVIVASTNRRIERAEREKAEDFDSEEEELL
REENEQEDEIFDQVGDCLGTLVKTFKTYFLPFFEELSMYLTPMLGKDKTAEERRIAICIF
DDVAEHCREAAVRYYDTYLPSLLEACTSENPDVRQAAVYGIGICAEFGGSAFRFHTGEAL
SRLYNVIKHPNALDLDNAMAYDNAVSALGKICQFHRDSIDATQVIPAWLSCLPIKNDLIE
AKLVHEQLCAMLEKSERELLGHNNRYLSKIVSIFAEILCAGKDLATEQTASRMINLLRQL
QTTLPPSVLASTWSSLQPQQQLALQSVLPS
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcaggcggaagcggacgcggcggcggtgctgggcgcggacccggcggcgctg
atggcgctgctcgcggaactgacctccccggccaacgaggcgcggtcgcgggcggagcgg
cagttccacgggctccgcgggtcccacccggacgcgctcgcgctgagcctcgcgcacctg
ctgctctccccggcgcacccctccgcgcccatcgccgccgtgctgctgcgccgcctcatc
gccccgtcgtcacagtccttctgctaccccgcgctgtcgcccgcatcgcagtcctcgctc
cgcgcgctgctcctctcagccgcctccgctcccgcgctccataggtccgtctcgaagaag
ctctccgacgccgtcgccgagctcgcctccttcctcctgcccaacaacgcgtggcccgac
ctcctcaccttcctgtacaagtccatcgcctccccgtcctcccctccggcgctacaggag
tcggcgctcaatatcctggcccgactggcatcccacctcgccgccggcttccccaaccta
cacgcgctcctcctctccgcgctctcccacccctcgtccgcggacgtccgcgtcgcgggg
ctcaacgccgccatcagcctcatccagtccctcccctccgcggctgaccgcgaccagttc
caggacctcctcccggccatgatgcgagctctcgctgagtctctcaactgcggtaacgag
ggctccgcgcaggaggcgctggagatgatgatcgagcttgccggcgcagagccgcggttc
ctgcgacgccagctgcccgacgtggtcgcctccatgctgcagatcgccgaggccccggga
ctagaggacggcacccgccaccttgccgtcgagtttgttgttacactcgctgaggcacgg
gaccgcgcgcctgggatgatgcggaagctgccgcggtacgttgggcggctctttgcagtg
ctcatgactatgctactcgatgtccaggatgaaccggcgtggcatgccgcggtgtccgaa
gaggaagatgctggggagacgggaagctatgtcttcgcgcaggagtgtctggaccggctg
gcaatcgctgttggtgggaacacgattttgcctgtggcagctgagttgcttccatcattt
tttgcttctgaagagtggaagaggcggcatgcagcactggtgacgatagcgcagattgca
gagggctctgctaaggtgatgattaagaatctcgagcaggtggttgggatggtgctgaat
tctttccaggatcctcatccgcgggtgaggtgggcagcaataaatgcagtagggcagctt
tcaacggacctcgggcctgagttgcagaatcagttgcaccatgtcgtggtacctgcattg
gcttcagcaatggatgatttccagaacccacgcgtgcaggcacatgcagcttctgcgatt
ctaaacttcagtgaaaactgcagacctgatattttgacactatacttggatggaatagtc
gggagacttcttcagttgcttcagactggaaaccaaatggtgcaagaggctgctttaacc
gctttagcatctgcagcagattcttctcaggaacacttccaaaaatattatgatgcagtc
atgccatacctcaaggctattctcatgaatgcaactgataaatccagcagaatgttacgt
gccaaatccatggaatgcatcagtttagttggtatggcggttgggaaacaaaaattcaag
gatgatgctaagcaggtgatggaagttctgatgaaacttcaaggatctcaaatggaggct
gatgaccctataacaagttacatgttccaagcatgggctagactgtgcaaatgccttggt
caggacttcctaccttacatgagtgttgttatgccccctctgctccagtctgctcagctt
aaaccagatgtgagtgtcacttctgctgggtcagaagaaaatggtgaatctgatgatgag
ggtgttgagactattacactgggagataagagaattggtatccggactagtctactggag
gagaaagctacagcatgtaatatgctctgttgctacgctgatgagctcaaggaaggattt
ttcccatggattgatcaggttgcaactacacttgtacctctcctcaagttctattttcat
gaagaagttaggaaggcagctgtttcagcaatgccggagcttttgctctcagcaaaattg
gcagtagaaaagggtcaagctcagggtcgggataattcttatcggaagcatctgtctgat
tacatagtcccagctcttatagaggccatgaataaagaacctgagccacaaatttgcgcg
agcattctggagtcattgaatgagtgcatacagctatcaggaacacatcttgaggaaggt
caagtcagggccatagtggatggaatcaaagaagtaatagtggcaagcactaataggagg
atagaacgagcagagagggaaaaggcggaagattttgattctgaagaagaggaactactc
agagaagaaaatgaacaggaggatgaaatttttgaccaagttggtgattgtctgggcact
cttgtcaaaaccttcaagacttatttccttccgttttttgaagaactctccatgtatttg
acacctatgttgggcaaggataaaacagcagaagaaagaagaattgccatatgcattttt
gatgatgttgcagagcactgtcgtgaagcagcagttaggtattatgatacatatcttcct
tctctgttagaagcatgcacaagtgaaaatccagatgttaggcaggctgcagtttatgga
attggcatttgtgctgagtttggtggttctgcattcaggtttcacacaggggaggcccta
tctagattatacaatgtaatcaaacatcccaatgcgttggatttggataatgcgatggca
tatgacaatgctgtttctgctctaggaaaaatatgccaatttcatcgtgatagcattgat
gcaactcaggtcattcctgcttggttaagttgtctaccaataaaaaatgacttaattgag
gccaagcttgtccacgagcagctgtgtgcaatgcttgagaagtccgagagggaacttttg
ggtcacaacaatcggtacctttcaaagattgtctctatttttgcagagatattatgtgcg
ggcaaggatctggcaacagaacaaaccgccagcaggatgattaatctgctcaggcagctt
cagacaacgttgcctccttcagtattagcctcaacatggtcttctttgcagccacagcaa
cagcttgctctacagtccgtattgccgtcatag
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