Phragmites australis (common reed): 133915788
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Entry
133915788 CDS
T10575
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7 isoform X1
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
paua Phragmites australis (common reed)
Pathway
paua04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
133915788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133915788
04121 Ubiquitin system [BR:
paua04121
]
133915788
03029 Mitochondrial biogenesis [BR:
paua03029
]
133915788
Membrane trafficking [BR:
paua04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
133915788
Atg8 conjugation proteins
133915788
Ubiquitin system [BR:
paua04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
133915788
Mitochondrial biogenesis [BR:
paua03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
133915788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
Motif
Other DBs
NCBI-GeneID:
133915788
NCBI-ProteinID:
XP_062215079
LinkDB
All DBs
Position
1:complement(32906369..32912439)
Genome browser
AA seq
1032 aa
AA seq
DB search
MAGAGFPRPLQVHAIQSCAEEGFWDALRRLKLDVLGTDDSPIPITGYYTPRQNRKVASRL
RLCPESLVPPSHNSIGSRNNCPVPGTLINTNNTRGFQNLDRELLLKAEAKKILHDIMSGK
VEEDPALLLRFLVISFADLKNWKVYYNVAFPSLVFSSKMTLLSLQDSSQVLSKEEAASLY
KSLQEWRASSETTVPFFLVSISSDSSASVRQLKDWKACQGNCQNLLFGFYDHGFRHDNGK
LDFPGWALRNYISFLSMRWKIEKVQFFCYRELRGQPDLEQSLIGEASFPPPCGWDDPDYV
PEVIGWEGEKPGKGTKEMIPKEINLQSMNPASQDEEKQLMHLKLMGWRHFPVNIDKLSRV
RVLLLGAGILGCEVARLLMTWGVRKLSVVDSGSVATSDLVKQSLYIDKDCGVPRVTAIVP
HLKARCPAMEVEGTKMEIPVPGHPVSPSKIASVLDDCKRLQTLVASNDVVFLLTDTWESK
WLPTLLCANQNKIAVTAVLGYDNYLVMRHGAGPGTRSGVMDEVIAQIEHLSTEDALGRQR
LGCCFCNDAASLVNSIPNGTLDQQAIALPGLTSIASGEAVELFARMLHHPDEIHAAGDIA
GMDTEHQLGLLPHQLRGSLPKCVLSTELGNSSSNCTACSNAVLSEYRRRGLDFVVQAINH
PTYLKDLTGITDLKKPDACPRMPANIPVNSDKFSDVRCLLLGVGTLGCDVARILMDCGVR
KLTVVDSGRVVVSNLARQSLYTSDDRGAPKATAILRHLADRCPSVDAQGIQMEIPMPGHP
VSPSEVAGVLEDCKRLEELVASHDAIFLLTDTRESRWLPTLLCTNENKIAITAALGYDSY
LVMRHGAGPGINCEGSDVVATTGKLSTKDAFGRQRLGCYFCNDVVAPVDSVSNRTLDQQC
TVTRPGLASIASGRAVDLFTRMLHHPDGIHAPGENAGTIGEHPLGLLPHQIRGSLSQYNL
LTLLGYSSSNCTACSNAVLSEYRRRGMDFVMQVINEPTYLEDLTGLTDLMKSVAYSQVEW
LDGTDEDELVDI
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggcagggttccctcggccgctgcaggtccacgcgatccagagctgcgcggag
gaggggttctgggacgcgctccgccgcctcaagctcgacgtcctcggcaccgacgactcc
cccatccccatcaccggttattatactccacgccagaatcgcaaggttgcaagccgctta
aggctatgcccagaatcattagtgccaccatctcacaattccattggctctaggaacaat
tgcccagtcccaggtaccctcataaacactaataacacgagaggattccaaaacctagac
agagagcttcttctgaaagcagaagcgaagaagatattgcatgacattatgtccggtaaa
gtagaagaggatcctgctctgctacttaggttccttgtgatatcatttgctgatctgaag
aattggaaggtctattacaatgttgcattcccctcactggttttcagctctaaaatgacc
ctgctcagcctgcaagactcgtcacaagtgctcagcaaagaagaggcagcatccttgtat
aaatcattgcaagagtggcgtgcttctagtgaaacaacagttccattctttctggttagt
atatcctcagattcctctgcctctgtaagacaactgaaggactggaaagcttgccagggg
aactgtcaaaatctgctatttgggttttatgatcatggctttcggcatgacaatggcaaa
ctagatttccctggctgggctcttagaaactacatttcattcctgagcatgcggtggaag
atcgagaaagttcagttcttctgctaccgagaattgcgtgggcagcctgatctagaacag
tccttaattggcgaagcatcatttccaccaccttgtggctgggatgaccctgattatgta
cctgaagttattgggtgggaaggagaaaagcctgggaagggaacaaaagaaatgatacca
aaagaaataaatcttcaatcaatgaatccggcaagtcaggatgaagaaaaacaattgatg
cacttgaagcttatggggtggcgccactttccagtgaatatagacaagttatcgcgtgtt
cgagttcttctgttgggtgctggaattcttggatgtgaagttgctcgcctacttatgacc
tggggtgtacggaaactttcagtggttgacagtggttctgttgccacatctgatcttgtc
aaacaatcactctacatagacaaggactgtggagtcccaagagtgactgcaatagttcca
catctcaaagcaagatgtcctgcaatggaggtagaaggcacgaaaatggaaataccagtg
cctgggcatcctgtttctcccagcaaaatagcaagtgtgcttgatgattgcaagcgtctc
caaacattagtggcttccaatgacgtggtctttttgttaactgacacatgggagagcaag
tggcttccaactcttttgtgtgcaaatcaaaacaagattgctgttactgcagtattagga
tatgacaattaccttgtcatgcgacatggtgctggtccaggaacaagaagtggggttatg
gatgaagtgattgctcagatagagcatttgtccacagaagatgctcttggacgtcaaaga
ttgggctgttgtttctgcaatgatgctgcttcccttgtaaattcaatccctaatggaaca
ctagatcaacaagcaatagcactacctggactaacctcgattgcatctggcgaagcagtg
gagctgtttgctaggatgttacatcatcctgatgagatacatgctgcaggagatattgct
ggtatggacactgaacatcagcttggtctattgccacatcagctacgaggatcactccca
aagtgtgttttatcaactgaattaggcaattcctcaagcaattgtactgcatgttccaat
gcagtattgtcagagtatagaagaagaggattggattttgttgtgcaggccatcaaccat
ccaacatatctaaaagatctaacaggcattactgatttgaaaaagccggatgcttgtcct
agaatgcccgccaatatccctgtaaattcagacaagttttccgatgtcagatgcctactt
ttaggtgttgggactcttggatgtgatgttgcccgtattcttatggactgtggtgtacgg
aagctaacagtggttgatagtggccgtgttgttgtgtcaaatttggcgagacaatcactc
tacacatctgatgatcgtggtgcccccaaagcgactgcgatacttaggcatctagcggac
agatgtccttcagtggatgcacaaggcattcaaatggaaatacctatgccagggcatcct
gtgtctcctagtgaagtagctggtgtgcttgaagattgcaagcgcctggaggaattagta
gcttcccatgatgctatcttcttgttgaccgacaccagggaaagtagatggcttccaacg
ctcctctgcactaatgaaaacaagattgcgattaccgcagcattagggtatgacagttac
cttgtcatgcgacatggggctggtcctggcataaattgtgaaggttcggatgtggttgct
accacgggtaagctgtccacaaaggatgcttttggacgtcaaagactggggtgctatttc
tgcaatgatgttgttgctcctgttgattcagtctccaatcgaacactggatcaacaatgt
acagtaacacgacctggtctagcctctattgcatctggacgtgccgttgacctcttcaca
agaatgctacatcatccagatgggatacatgctccaggagagaacgctggcacgatcggt
gagcatccgcttggcctattgcctcaccagatacgaggatcactgtcacagtacaactta
ttaacactcttgggttattcctctagcaattgcacggcgtgttccaatgcggtattgtct
gaatatcggaggagaggaatggattttgtgatgcaagtgatcaacgaaccaacttatttg
gaagacctaactggcctgacggacttgatgaaatctgtagcttactctcaggtcgagtgg
ttagatggaaccgatgaggacgagttagtcgacatctga
DBGET
integrated database retrieval system
