KEGG   Phragmites australis (common reed): 133915823
Entry
133915823         CDS       T10575                                 
Name
(RefSeq) U3 snoRNP-associated protein-like YAOH
  KO
K14793  ribosomal RNA-processing protein 9
Organism
paua  Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:paua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:paua03009]
    133915823
Ribosome biogenesis [BR:paua03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    133915823
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_TEP1_2nd WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 WDR55 Beta-prop_EML WD40_Gbeta EIF3I Beta-prop_WDR90_POC16_2nd DSE1_N Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_VPS8 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_SCAP ASA1 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st ANAPC4_WD40 PAC11 CFAP251_N Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_NOL10_N Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_DCAF4 TP_0598_N Nop14 Beta-prop_BBS7 CPSF100_C
Other DBs
NCBI-GeneID: 133915823
NCBI-ProteinID: XP_062215141
LinkDB
Position
4:complement(16317414..16324555)
AA seq 518 aa
MAPRPRKRASRPKPRPGSRRGGGRGGGGGEDPFFESEPKRRRGGRDEDIESEDSDDDGVA
ALDGSVDKDGEEGGKEEEEEEEEETVGEKKMRMAKEWLKRVTEAAKKEDEDYDDDDEEDG
SRRVAEILQRKQLEESGRKRRDLAARVLPPDPKDGFKVLVKHRQPVTAVALSKDSDKGFS
ASKDGVIVHWDVETGKSDKYLWPSENVLVSHHAKPPLSAKRSKHVLALAVSSDGRYLASG
GLDRHIHLWDVRSREHIQAFSGHRGPVSCLDFGLDSSELFSGSFDRSIMQWNAEDRTYMN
CLYGHQNEILTMDALSKDRLLTVARDRTMHLWKIPEESQLVFRAPAAASLECCCFIDDKE
FLSGSDDGSIELWSIMRKKPTHIIRNAHPVSHDNVDSLGNDDQELPKENGLHNPENVSSA
QSWVSAVAVRKGSDLAASGAGNGLVRLWAIEPDSKGIQPLFNLKLDGFVNALAIAKSGRF
IVAGVGQEPRLGRWGRVRSAQNGVAIHPIRLKEEKEDF
NT seq 1557 nt   +upstreamnt  +downstreamnt
atggcgccgcgcccccgcaagcgggcctcgcgccccaagccccgcccgggctcccgccgc
ggcgggggcagaggcgggggcgggggcgaggacccctttttcgagtccgagcccaagcgc
cgccgcgggggccgcgacgaggacatcgagagcgaggacagcgacgacgacggcgtggcg
gcgcttgacggcagcgtcgataaggatggggaggaggggggtaaggaggaggaggaggag
gaggaggaggagacggtgggggagaagaagatgcggatggcgaaggagtggctgaagagg
gtgacggaggccgcgaagaaggaggacgaggactatgacgatgacgatgaggaggacggg
agtaggcgggttgcggagatcctgcagaggaagcagctcgaggagagcggcaggaagcgg
agggatctcgccgcgagggtattaccaccagatcccaaggatggctttaaggttcttgtg
aagcaccgacaacctgttaccgccgttgctttatccaaggatagtgataaggggttttca
gcatcaaaagatggagtcattgtgcattgggatgtcgaaactggaaaaagtgacaagtat
ttatggccaagtgaaaatgtattggtctctcatcacgctaaaccacctctatcagctaaa
agaagtaagcatgtgctagctttagctgtcagttcagatggtcgctatttggcaagtggt
ggtttggaccgtcatatccatttatgggatgttcgatcacgggagcacatacaggcattc
agcggtcatcgaggaccagtatcgtgccttgattttgggctggactcttcagagttattc
tctggttcttttgatcgttcaataatgcagtggaatgcagaggacagaacatacatgaac
tgcctttatgggcatcaaaatgaaatcttgacaatggatgcacttagtaaagataggctt
ctgactgtagcacgggatcggacaatgcatctttggaagattccagaagagtcgcagtta
gtgttccgtgctcctgctgctgcatctttagagtgctgctgctttattgatgacaaggaa
tttttgtctggatctgatgatggaagcattgagctttggagcataatgaggaaaaagcct
actcacataataagaaatgctcatccagtatcgcatgataatgttgattcacttggcaat
gatgatcaggagttgcctaaagaaaatggactacataatcctgaaaatgtgtcatcagcc
cagtcatgggttagtgctgttgctgtaagaaaaggttctgaccttgctgcatcaggagca
ggaaatggtttagttcgcctctgggctatcgaacctgattctaagggaattcaaccatta
ttcaatttgaaactggatggatttgttaatgctcttgccatagcgaaatctggacgtttt
attgttgctggtgttggccaggagcctcgccttggaagatggggacgtgttcgatcggct
caaaatggagttgcaatccatccgatccgactaaaagaggaaaaagaggacttctag

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