Phragmites australis (common reed): 133915823
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Entry
133915823 CDS
T10575
Name
(RefSeq) U3 snoRNP-associated protein-like YAOH
KO
K14793
ribosomal RNA-processing protein 9
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133915823
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
90S particles
Other 90S particles
133915823
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_SPT8
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Nop14
Beta-prop_BBS7
CPSF100_C
Motif
Other DBs
NCBI-GeneID:
133915823
NCBI-ProteinID:
XP_062215141
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Position
4:complement(16317414..16324555)
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AA seq
518 aa
AA seq
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MAPRPRKRASRPKPRPGSRRGGGRGGGGGEDPFFESEPKRRRGGRDEDIESEDSDDDGVA
ALDGSVDKDGEEGGKEEEEEEEEETVGEKKMRMAKEWLKRVTEAAKKEDEDYDDDDEEDG
SRRVAEILQRKQLEESGRKRRDLAARVLPPDPKDGFKVLVKHRQPVTAVALSKDSDKGFS
ASKDGVIVHWDVETGKSDKYLWPSENVLVSHHAKPPLSAKRSKHVLALAVSSDGRYLASG
GLDRHIHLWDVRSREHIQAFSGHRGPVSCLDFGLDSSELFSGSFDRSIMQWNAEDRTYMN
CLYGHQNEILTMDALSKDRLLTVARDRTMHLWKIPEESQLVFRAPAAASLECCCFIDDKE
FLSGSDDGSIELWSIMRKKPTHIIRNAHPVSHDNVDSLGNDDQELPKENGLHNPENVSSA
QSWVSAVAVRKGSDLAASGAGNGLVRLWAIEPDSKGIQPLFNLKLDGFVNALAIAKSGRF
IVAGVGQEPRLGRWGRVRSAQNGVAIHPIRLKEEKEDF
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcgcccccgcaagcgggcctcgcgccccaagccccgcccgggctcccgccgc
ggcgggggcagaggcgggggcgggggcgaggacccctttttcgagtccgagcccaagcgc
cgccgcgggggccgcgacgaggacatcgagagcgaggacagcgacgacgacggcgtggcg
gcgcttgacggcagcgtcgataaggatggggaggaggggggtaaggaggaggaggaggag
gaggaggaggagacggtgggggagaagaagatgcggatggcgaaggagtggctgaagagg
gtgacggaggccgcgaagaaggaggacgaggactatgacgatgacgatgaggaggacggg
agtaggcgggttgcggagatcctgcagaggaagcagctcgaggagagcggcaggaagcgg
agggatctcgccgcgagggtattaccaccagatcccaaggatggctttaaggttcttgtg
aagcaccgacaacctgttaccgccgttgctttatccaaggatagtgataaggggttttca
gcatcaaaagatggagtcattgtgcattgggatgtcgaaactggaaaaagtgacaagtat
ttatggccaagtgaaaatgtattggtctctcatcacgctaaaccacctctatcagctaaa
agaagtaagcatgtgctagctttagctgtcagttcagatggtcgctatttggcaagtggt
ggtttggaccgtcatatccatttatgggatgttcgatcacgggagcacatacaggcattc
agcggtcatcgaggaccagtatcgtgccttgattttgggctggactcttcagagttattc
tctggttcttttgatcgttcaataatgcagtggaatgcagaggacagaacatacatgaac
tgcctttatgggcatcaaaatgaaatcttgacaatggatgcacttagtaaagataggctt
ctgactgtagcacgggatcggacaatgcatctttggaagattccagaagagtcgcagtta
gtgttccgtgctcctgctgctgcatctttagagtgctgctgctttattgatgacaaggaa
tttttgtctggatctgatgatggaagcattgagctttggagcataatgaggaaaaagcct
actcacataataagaaatgctcatccagtatcgcatgataatgttgattcacttggcaat
gatgatcaggagttgcctaaagaaaatggactacataatcctgaaaatgtgtcatcagcc
cagtcatgggttagtgctgttgctgtaagaaaaggttctgaccttgctgcatcaggagca
ggaaatggtttagttcgcctctgggctatcgaacctgattctaagggaattcaaccatta
ttcaatttgaaactggatggatttgttaatgctcttgccatagcgaaatctggacgtttt
attgttgctggtgttggccaggagcctcgccttggaagatggggacgtgttcgatcggct
caaaatggagttgcaatccatccgatccgactaaaagaggaaaaagaggacttctag
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