Phragmites australis (common reed): 133915923
Help
Entry
133915923 CDS
T10575
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.8-like
KO
K14487
auxin responsive GH3 gene family
Organism
paua Phragmites australis (common reed)
Pathway
paua04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133915923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
133915923
NCBI-ProteinID:
XP_062215310
LinkDB
All DBs
Position
4:24088168..24090915
Genome browser
AA seq
612 aa
AA seq
DB search
MAVMTDMPAATALRAPAPAAAAAGSERDAEKLRFIEEMTSDVDAVQERVLVEILARNAET
EYLTRCGLAGATDRAAFRAKVSVVTYEDLQPDIQRIANGDRSPILSAHPISEFLTSSGTS
AGERKLMPTIKEELDRRQLLYSLLMPVMNLYVPGLDKGKALYFLFVKSETTTPGGLTARP
VLTSYYKSEYFKNRPYDPYHDYTSPTAAILCADAFQSMYAQMVCGLRQRHDVLRVGAVFA
SGLLRAIRFLQLNWEQLADDIEAGLLTPRITDPSVRDAVAAILRADPELARFLRAECSRG
DWAGIITRVWPNTKYLDVIVTGAMQQYIPTLEYYSGDLPMACTMYASSECYFGLNLRPMC
HPSEVSYTIMPNMGYFEFLPVDEASGVASGDAAQLVDLARVEAGREYELVITTYAGLYRY
RVGDILRVTGFHNAAPQFRFVRRKNVLLSIESDKTDEAELQHAVERASALLRPHGAAVVE
YTSHACTKSIPGHYVVYWELLTKGPQTQTGAAAVEGDVLDRCCLEMEEALNSVYRQSRVA
DSSIGPLEIRVVRSGTFEELMDYAISRGASINQYKVPRCVSSPPIVELLDSRVVSQHFSP
SPPHWTPARRSD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgatgacggacatgccagcggcgacggcgctgcgtgcgccggcgccggctgcc
gcggcggcggggagcgagagggatgccgagaaactgaggttcatcgaggagatgacctcc
gacgtcgatgccgtgcaggagcgcgtcctggtcgagatcctcgccaggaacgccgagacc
gagtaccttacgcgctgcggcctcgctggggccaccgaccgcgccgccttccgggccaag
gtgtctgttgtcacctacgaggacctgcagcctgacatccagcgtatcgccaacggcgac
cgctcgcccatcctctccgcccaccccatctccgagttcctcaccagctcggggacttcg
gccggcgagcgcaagctgatgccaaccatcaaggaagagctcgaccggcggcagctgctc
tacagcctcctcatgccggtcatgaacctgtacgtgccggggctggacaagggcaaggcg
ctctacttcctcttcgtcaagtcagagaccacgacgcccggcggcctcacggcgcggccc
gtgctcactagctactacaagagcgagtacttcaagaaccgcccgtacgacccgtaccac
gactacacgagccccacggcggccatcctctgcgccgacgcgttccagagcatgtacgcg
cagatggtgtgcggcctacgccagcgccacgacgtgctccgcgtcggcgccgtcttcgcc
tccggcctcctccgcgccatccggtttctccagctcaactgggagcagctcgccgacgac
atcgaagcgggcttgctcaccccgcgcatcaccgacccgtccgtccgcgatgccgtcgcg
gccatcctccgggcggacccggagctcgcccgcttcctccgcgccgagtgctcccgcggc
gactgggcgggcatcataacccgcgtctggcccaacacaaagtacctggacgtgatcgtc
accggcgcgatgcagcagtacatccccaccctggagtactacagcggtgacctgcccatg
gcgtgcaccatgtacgcctcgtcggagtgctacttcggcctgaacctccgcccgatgtgc
cacccgtcggaggtctcgtacacaatcatgcccaacatgggatacttcgagttcctcccc
gtggacgaggcgagcggcgtggcgtcgggggacgcggcgcagctggtggacttggcccgc
gtggaggctgggcgcgagtacgagctggtgatcacgacgtacgccgggctgtaccggtac
cgcgtgggcgacatcctgcgcgtgacggggttccacaacgcggcgccgcagttccggttc
gtgcggcgcaagaacgtgctgctgtccatcgagtcggacaagaccgacgaagcggagctg
cagcacgccgtggagcgcgcgtcggcgctgctccggccgcacggcgcggcggtggtggag
tacacgagccacgcgtgcactaagagcatcccggggcactacgtcgtctactgggagctg
ttgaccaaagggccccagacccagaccggcgccgcggccgtggagggcgacgtgctggac
cgctgctgcctggagatggaggaggccctgaactcggtgtaccggcagagccgggtggcg
gacagctcgatcgggccgcttgagatccgggtggtccggtctggcacgttcgaggagctg
atggactacgccatctcccgcggcgcctccatcaaccagtacaaggtgccccgctgcgtg
tcctccccgcccatcgtggagctgctggactcccgtgtggtatcgcaacacttcagcccc
tcgccgccgcactggacgccggcacgccggtccgactag
DBGET
integrated database retrieval system
