Phragmites australis (common reed): 133916028
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Entry
133916028 CDS
T10575
Name
(RefSeq) KH domain-containing protein At4g18375-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133916028
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
133916028
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
133916028
NCBI-ProteinID:
XP_062215481
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Position
4:28898113..28902874
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AA seq
590 aa
AA seq
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MSVVTSRSNCSGSLGFLPSPIPRRRWSSSRRQPRSLAPRVRRARGAKIMTGHRNSYGKRH
SDYAENGGGKRRNPADDTYAPGPDDTAYRYLCASRKIGSIIGRGGEIAKQLRAETQAKIR
IGESVPGCDERVITIFSSSRETNTIDDAEDKVCPAQDALFRVHERLATDEGPGNEDNEEM
LPQVTVRLLVPSDQIGCIIGKGGNIIQGIRGDTGAQIRVLSNDHIPACAISGDELLQISG
DAVVVRKALRQVSSRLHDNPSRSQHLLASSLTQPYPGSSHLGSSSTAPVVGIAPVVPPYG
GYKGDVAGDWPSIYQSRRDESSAKEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGAFIK
VDSSNSGAEDDCIITVSAKEFFEDPVSPTIDAAVRLQPRCSEKSDAESGEQSYTSRLLVS
TSRIGCLIGKGGSIITEIRRSSRSNIRILSKENVPKVAAEDEEMVQISGDLDVARHALVQ
IATRLKANFFEREGALSAFPPVIPYHPLPAGVSDEPKYLSRDTKPAGHGYLYSSGYRALD
DMIPANSYANYSSSQAPGGGYGAYSGYSSRSGASGLSGHSSLSYGKRHGY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggtcacatcgcgtagtaactgttctggctccctcggcttccttccctccccg
atccctcgccgccgctggtcttcctcgcgacgccaacccaggtccctcgcgcctagggtt
cgccgagcccgtggcgccaagataatgacgggccaccgaaacagttatggaaagcgacac
tctgattatgcagaaaatggaggcggtaagagaagaaatcctgctgacgatacctatgct
cctggtccagatgatactgcgtatcgctacctctgcgcctctagaaaaattgggagtata
attggcaggggtggagagattgcaaagcagttgagggccgagactcaagctaagattagg
attggtgagagtgttcctggctgtgatgagcgggttatcacaatatttagctcaagtagg
gaaactaataccattgacgatgctgaagataaggtttgccctgctcaggatgctctcttt
agagttcatgagaggcttgccactgacgagggtcctgggaacgaagacaatgaagaaatg
ttacctcaagttactgttcgcttgcttgtgccatcagatcaaattggatgcattatcgga
aaaggtgggaatatcatccaaggaatccgtggtgacactggtgcacaaatacgtgtgctt
agtaatgatcatatccctgcatgcgccattagtggcgacgaactgcttcagatatctggg
gatgcggtagttgtcagaaaggctcttcgtcaagtgtcatctcgcctccatgataaccca
tctaggtcacagcatcttcttgcatccagcttgacccaaccttatccagggagctcccac
cttggtagttcctctactgcaccggttgtagggattgctcctgtagttcctccttatggt
ggatacaaaggtgatgtggcaggagattggccttctatataccaatcacgcagggatgag
agctctgcaaaggaatttagtttgcgtttactttgtgctgctgcaaatgtgggaggtgta
attgggaagggcggtggaattatcaaacagattaggcaggaatctggagcttttattaaa
gtggatagctccaattcaggtgctgaagatgactgcataattacagtttctgccaaagag
ttctttgaagatcctgtttctccaacaattgatgctgcagttcgtttgcagcctagatgc
agtgagaaaagtgatgcagaatcaggggagcaatcgtacacatcacgcttgttggtgtca
acatcacgtattgggtgcctgattggcaaaggtggttcaatcattactgagatacgaaga
tcatcaagatcaaacatacgcatcctttctaaggaaaatgttccaaaagtggcagcagaa
gatgaggagatggttcagatcagtggagaccttgatgttgcaaggcatgcccttgtgcaa
atagctacaaggctgaaagccaatttctttgaaagagagggcgctttatcagcatttcca
cctgtgatcccttaccatcctttgcctgctggtgtttcggatgaaccaaagtatctaagc
agggacactaagcctgctggacatggttatttgtattcaagtggatatcgtgcattggat
gatatgattcctgccaacagttatgctaactatagcagctcccaggcccctggaggagga
tatggggcttacagtgggtacagtagtcgctctggcgccagtgggttatctggtcatagt
tctctttcatatggaaagcgtcatggttattag
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