Phragmites australis (common reed): 133916127
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Entry
133916127 CDS
T10575
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
paua Phragmites australis (common reed)
Pathway
paua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133916127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133916127
Spliceosome [BR:
paua03041
]
Common components
Common spliceosomal components
SR proteins
133916127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
133916127
NCBI-ProteinID:
XP_062215636
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All DBs
Position
4:complement(32103026..32107094)
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AA seq
283 aa
AA seq
DB search
MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAED
AIAGRDGYNYDGNRLRVEAAHGGRSNASSHDRSSGFGGGARRGVSRHSEYRVLVTGLPSS
ASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDTEFKNAFGRAF
IRVKEYDGKRGRSYSRSRSPSRSYSRSRSPSKSPRARRSASRSRSRSASSRSRSASKGRS
PSRSPARSKSPNASPANGEVGSPKKQSPSRSPSGSRSPDAKPE
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcgctggagccggacgatctatgtcgggaacctccctggcgacatccgggag
agggaggtggaggatctgttctacaagtatgggagaattgttgacattgacttgaaggtc
cccccaaggccgcctggttatgcttttgttgagtttgaagatcctcgtgatgctgaagat
gcaattgctgggcgggatggttacaactatgatggaaaccgtctaagagttgaagctgca
catggtgggaggagtaatgcttcctcgcatgatcgttcaagtggctttggtggtggagca
cgccgtggtgtgtcgaggcactctgagtatcgtgttcttgttactggactgccttcttct
gcatcatggcaagatttaaaggaccatatgaggaaggctggtgatgtttgtttctctgaa
gtgtaccgtgaaggcggtggcaccgtagggattgtggactacacaaactatgatgatatg
aaatatgctattaagaaactggatgatactgaattcaagaatgcctttgggcgagctttt
ataagggtgaaggaatatgatggcaaacgtggccgctcctattcacgtagccgaagccca
agtcgtagctacagcagaagcaggagcccatccaaatctcccagggcccgccgttcagca
tctagatcccgttcgaggtctgcttcttcccgttcaaggtcagcatcaaaaggacgttct
ccgtcaagatcaccagcaagatcaaaatctcctaatgcttctccagcaaatggtgaagta
ggaagtcccaagaaacagagcccaagcaggagcccatctggctcacgctctcccgatgcc
aaacccgaatag
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