Phragmites australis (common reed): 133916183
Help
Entry
133916183 CDS
T10575
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1-like
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133916183
Membrane trafficking [BR:
paua04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
133916183
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_DOCK9
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
TPR_DOCK
Motif
Other DBs
NCBI-GeneID:
133916183
NCBI-ProteinID:
XP_062215727
LinkDB
All DBs
Position
4:complement(33579327..33594027)
Genome browser
AA seq
1845 aa
AA seq
DB search
MTAQVATMEPAAAAGEGQRFKRIPRQARAGNLELDPLLNENLDQWPHLNELVQCYKADFV
KDDCKYGRYESVAPPSFQNQIFEGPDTDIETELQLCNARHSKPEDATEDDTPSTSGRQMY
ETDPSASSSKMHCSLSPLPAYEPAFDWENERSLIFGQRVPESLPAINNSGLKITVKVLSL
SFQAGLVEPFSGTICLYNRDKREKLSEDFYFHILPTDIQDAQVSLDRRGVFSLDAPSPSV
CLLIQLEKAATEEGGVTPSLYSRKEPVHLTEKEKQKLQVWSRIMPYKESFAWAMIPLFEG
NQAGGVGDVASPSSPVAPSISGSSSQDNIVDPISKLTLDGKLNHYSSGCPVIVEISNLNK
VKESYIEDSLQDPKRKVHKPVKGVLRLEVEKLHVGHNDVDNVSEGGSMSNGLNDAGELNN
GRYNRSSFDGTHSSRNSSAIAQKDAHHNGQISNADNDDHFQAFDFRMLTRSEPFSQLFHC
LYVYPLTVSLSRKRNLFVRVELRKDDSDIRKPPLEAVHPKDQNTMLQKWGHTQITVGTRM
ACYHDEVKISLPALLTPQHHLVFTFFHIDLQMKLEAPKPVIIGYSVLPLSTHIQLLSDVS
LPILRELVPHYLQESGKERMDYLEDGKTVFRLRLRLCSSLFPVNERIRDFFVEYDRHTLH
TSPPWGSELLEAINSLKNVESTALLQFLQPILNMLLHLIGDGGETLQVAAFRAMVNILTR
VQQESSDGAERNRFLINYVDFSFDDFGDRQAPVYPGLSTVWGSLARSKAKGYRVGPVYDD
VLAMAWFFLELVVKSMGLEQSRLFYHNLPLGEDAPPLQLKEGVFRCIMQLFDCLLTEVHE
RCKKGLSLAKRLNSTLAFFCYDLLSIIEPRQVFELVSLYMDKFAGVCQSVLHDCKLTFLQ
IICDHDLFVEMPGRDPSDRNYLSSVLIQEIFLTLDHDDLSQRAKAARILVVLICKHEFDA
RYQRSEDKLYIAQLYFPLIGQILDEMPVFYNLNSVEKREVLVVILQIVRNLDDATLIKAW
QQSIARTRLFFKLLEECITHFEHNKAGDSLLLGSSSRSPDVERPASPKYSERLSPSVNAY
LSEASRHEIRPQGTPENGYMWNRVSPQLSSPNQPYSLREALAQAQSSRIGSTARALRESL
HPVLRQKLELWEENLSTAVSLEVLGITEKFSVAAGARSITTDYAKLDCVTSVLMGLLSRS
QPLAFWKAFLPVVYNIFNLHGATLMARENDRFLKQIAFHLLRLAVFRNDSIRKRAVVGLQ
ILVRNSFNYFKNTTRLRVMLTITLSELLSDVQVTQMKSDGSLEESGEARRLRKSLEEMAD
VRSKDLLKDCGLPVTALEAAPEGSTDNRWSWVEVKHLSKCLVQALDAGLEHSLLGSVITV
DRYAAAEGFYKLAMAYAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVIMQALVG
RNDAVWSKEHVASLRKICPIVSTDVSAETSAAEVEGYGASKLTVDSAVKYLQLANKLFAQ
AELYHFCASIQELIIPVYKSRRAYGQLAKCHTSLTNIYESILEQEASPIPFIDATYYRVG
FYGERFGKLNKKEYVFREPRDVRLGDIMEKLSHIYEAKMDGNHTLHIIPDSRQVNADELQ
PDVCYLQITAVDPVMEDEDLGSRRERIFSLSTGTVRARVFDRFLFDTPFTKNGKTQGGLE
DQWKRRTVLQTEGSFPALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSE
GDQLPRLQSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAV
CKRAIRVHFRLIGEEDQEFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgacggctcaggttgcgacgatggagcccgcggcggcggcgggcgaaggacagcggttc
aagcggattccgcggcaggcgcgggcggggaacctggagctggatccactgcttaatgaa
aacttagatcagtggccacatctaaatgagctggtacagtgctacaaggctgattttgtg
aaggatgactgcaagtatggacggtacgagagtgttgcaccaccatccttccaaaatcaa
attttcgagggacctgatactgacatagaaacagaattgcagctttgtaacgctagacat
tccaagcccgaggatgctactgaagatgatacaccaagcacctctgggaggcaaatgtat
gaaaccgacccatctgcttcgtcttcaaaaatgcactgtagtttgtcaccactaccagca
tatgaacctgcatttgattgggagaatgagaggtctttgatatttggccaaagggtgcca
gaaagtctccctgctataaacaacagtggattgaagataactgtcaaggtactatctttg
tcattccaagctggattagtcgagcctttcagtggaacaatttgcttgtacaacagagat
aaaagagaaaaactgtcagaggacttctattttcacatacttccaacagatattcaggat
gctcaggtttccttggatcgtcgaggtgttttttcgttggatgccccttcgccatcagtc
tgccttttgattcagctagagaaggctgctactgaagaagggggagtaacaccttccctt
tattctcgtaaagagcctgtgcacttaactgagaaagagaagcaaaagctgcaagtctgg
tctcgaatcatgccttataaagagtcatttgcatgggctatgattccactgtttgagggt
aaccaagctggtggtgttggtgatgttgcctctcctagcagtcctgtagcaccgagtata
tcaggatcgagttctcaagataacattgtggaccctatttcaaagcttactctggatgga
aaacttaaccattactcaagtggatgcccagttattgtagagatatcaaacttaaacaaa
gtgaaggaaagctatatagaggattccctccaagatccaaaacgcaaagtacacaaacca
gtgaaaggggtattgagattagaggtggaaaaacttcatgttggccacaatgatgtggat
aatgtttctgaaggtggaagcatgtccaatggtttgaatgatgctggtgagctcaataat
ggcagatacaacagaagtagctttgatgggacccacagttctaggaattctagtgccatt
gctcagaaagatgcacatcacaatggtcaaatttctaatgctgacaacgatgaccatttt
caagcttttgactttcggatgttgacgcgaagcgaaccattttcacaactttttcattgc
ctctatgtgtacccgttgactgttagcttgagccgcaaaagaaacctatttgtaagagtg
gaactgagaaaggatgattctgacatccgtaagcctccattagaggctgttcatcctaag
gatcagaacacaatgctacaaaagtggggccatacacagattactgttggaacaagaatg
gcttgttaccatgatgaagttaagatcagtctgcctgctcttttgacaccccaacatcat
ctcgtgttcacatttttccatatagatctccaaatgaaacttgaagccccgaaaccagtg
atcattgggtattctgtacttccactgtcgacacatattcagttgctttcagacgtgtct
ttgccaattttaagagagcttgtcccacattacctgcaggaaagtggaaaggagagaatg
gactacctggaggatggaaaaactgttttcaggttgcgcttaagactctgctcttcattg
tttccagttaatgaaaggataagagactttttcgttgaatatgaccgccatactctacat
acaagtccaccttggggttctgagcttcttgaggccataaatagtttgaagaacgttgaa
tccactgcactgttacaatttctgcaaccgatacttaatatgctgcttcatcttattggt
gatggcggtgagacccttcaggtcgctgcatttcgagccatggttaacattttaacgagg
gtacagcaggagtcatcagatggggctgagagaaatagatttcttatcaattatgttgat
ttttcttttgatgactttggtgatcggcaagcacctgtatatcctggtttatctactgtt
tggggtagcctagctcggagtaaggctaaaggttatagagttggtcctgtgtatgatgat
gtattggcaatggcttggttttttctggagcttgttgtaaaatcaatgggattggaacaa
agtcgtctcttctaccacaaccttccactaggagaagatgccccaccgctacaattgaaa
gaaggtgtcttcaggtgcatcatgcaactctttgattgccttctaaccgaggttcatgaa
cgctgtaaaaagggtttaagcttggcgaagcgcttgaacagcacacttgctttcttttgt
tacgatcttttatcaattattgagcctcggcaagtttttgagctggtttcgttgtatatg
gacaagtttgcaggagtttgtcaatcagttctccatgactgcaaattgacattcctgcag
ataatatgcgaccatgatctatttgttgagatgcctgggcgggatccctctgatagaaac
tatctgtcgtcagttcttattcaagagatctttctcaccttggaccatgatgatttatcc
caacgagcgaaagctgctcgaattttggttgtccttatatgcaagcatgaatttgatgca
cgttatcaaagaagcgaagacaagctgtacattgctcagctgtattttcctcttatagga
cagatcctagatgagatgcctgttttttacaacctaaattctgttgaaaagcgtgaagtt
ctagttgtcattttgcaaattgtaaggaacttggatgacgcaactcttatcaaagcatgg
caacaaagcattgctagaaccagattgttcttcaagcttcttgaagaatgtataacccat
tttgagcacaacaaagcaggagacagcttgctacttggctctagttctcggagccctgat
gttgagcgccctgcgtcccccaagtactccgaacgattatccccatcagttaatgcatat
ttgtctgaggcttcacggcatgaaataaggccccagggaacaccagaaaatggatacatg
tggaacagggttagtcctcagctaagttcccctaatcaaccctattcattaagggaagca
cttgctcaagcacaatcttcaagaattgggtcaacagctagggcattgagggagtctcta
catccagtgctgagacaaaagttggaactttgggaagaaaatctcagtaccgctgtgagc
ctcgaagtgttgggaataactgagaagttttcagttgctgcgggcgctcgtagcatcact
actgattatgctaagctagattgtgtaacatctgtcttaatgggtcttttatccaggagc
caacccttggctttttggaaagctttccttcctgtggtctataatatatttaatctccat
ggtgcaacactaatggcaagggagaatgaccgcttcttgaagcaaattgcttttcatctt
ttgcggcttgctgttttccgaaatgattcaattagaaaaagggctgttgttgggttgcag
attcttgttaggaactcgttcaattatttcaagaacactacaaggttgagggtcatgttg
acaattacgttatcagaattgttgtccgatgtgcaagtaactcagatgaaatctgatggt
tctcttgaagaaagtggtgaagctcgacgtcttaggaaatcactggaggaaatggctgat
gtgagaagcaaggatctattaaaagattgtggcctccctgttactgcactggaggcggct
cctgaaggttccaccgataataggtggtcttgggtagaggtgaaacatctgtctaaatgt
ctagtccaggcccttgatgctggtctggaacattctctcctgggttctgtgataactgtg
gacaggtatgctgccgctgagggtttctataagctagctatggcctatgcgcctgttcca
gatcttcacattatgtggttgctacatctgtgcgatgcacaccaggagatgcaatcatgg
gctgaagcagcacaatgtgcagttgctgtagctggtgtgatcatgcaggcacttgttgga
aggaatgatgctgtgtggagcaaggagcatgttgcttccttgcgtaagatttgtcctatt
gtgagcactgacgtgagcgcagaaacatctgcagctgaagttgagggatatggtgcatcc
aaactaactgtggattcagctgtcaagtatcttcaacttgccaacaaactctttgcacaa
gctgaactctaccatttttgtgctagcatccaggaactcatcattcctgtgtacaaaagc
agaagggcttatggacagctggctaaatgtcatacatcactcacaaacatctatgagtcg
attcttgaacaggaggctagtcctataccatttattgatgctacatactaccgagttggt
ttttatggtgagcgctttggcaaactcaacaaaaaggagtatgtgtttagagagccacgg
gatgtacgtcttggtgacattatggagaagcttagtcatatatatgaggctaaaatggat
ggcaatcacaccttacacatcattccagactcgagacaagtcaatgctgatgagttgcaa
ccagatgtctgctatttacagatcactgctgttgatcctgttatggaggatgaggatttg
gggagtaggagggaaaggattttttctttatccactggtactgttcgtgcacgtgtgttt
gaccgttttctttttgatacaccattcacaaagaatggaaaaacacaaggtggtctagaa
gaccagtggaagaggcgcacagtgctccagacagagggttcatttcctgctttggtgaac
cgcctgctagttatcaagtctgaatctctggagttctctcctgtagagaatgcgattgga
atgatcgagacaagaacagctgcattgagaaatgaactagaagaaccacggagttctgaa
ggtgatcaactaccaaggcttcaaagcttgcaacggatactccaagggagtgtggctgtt
caggtcaacagtggagtattaagtgtctgcactgcattcttatccggtgagcctgccact
aggctccgatcacaagaactgcagcagctcatcgccgcattgcttgaattcatggctgtc
tgcaagcgtgcaatccgtgtgcatttcagattgataggcgaagaagaccaggaatttcac
acccaacttgtcaatgggttccagtcacttactgctgagctttctcactatatccccgct
atactgtcggagctatga
DBGET
integrated database retrieval system
