Phragmites australis (common reed): 133916383
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Entry
133916383 CDS
T10575
Name
(RefSeq) ABC transporter B family member 20-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
paua Phragmites australis (common reed)
Pathway
paua02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133916383
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paua02000
]
133916383
04147 Exosome [BR:
paua04147
]
133916383
04090 CD molecules [BR:
paua04090
]
133916383
Enzymes [BR:
paua01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133916383
Transporters [BR:
paua02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133916383
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133916383
CD molecules [BR:
paua04090
]
Proteins
133916383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_15
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
133916383
NCBI-ProteinID:
XP_062216010
LinkDB
All DBs
Position
4:38136885..38144936
Genome browser
AA seq
1413 aa
AA seq
DB search
MVPTGLFGWASPHVQPLTPVSEVSEPPESPSPYGDGPAGDAGVGAREGEGAGAGEEEVED
DEVEPPPAAVSFWRLFEFADGFDWALMAAGSLAAAAHGAALVVYLHYFGRALNLLDSERV
ESALHGRSDELFHRFKEHALYIVYIAAGVFVAGWIEVSCWILTGERQTAVIRSKYVQVLL
TQDMSFFDTYGNNGDIVSQVLSDVLLIQSAISEKVGNYIHNMATFVGGLIVGLLNCWQIA
LLTLATGPLIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAISYIRTLYAFTNETLAKY
SYATSLQATLRYGILISLVQGIGLGFTYGLAICSCALQLWVGRHLIARGKADGGEVVVAL
FSVILSGLGLNQAATNFYSFEQGRIAAYRLYEMISRSTSSTNQEGITLPQVQGNIEFRNV
YFSYLSRPEIPILSGFFLTVPARKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGEN
IKNLKVEWLRSQIGLVTQEPALLSLSIRENIAYGRSATFDQIEEAAKTAHAHRFISSLEK
GYETQVGQAGIALTDEQKIKISIARAVLSNPSILLLDEVTGGLDFEAEKAVQEALDVLML
GRSTIIIARRLSLIKNADYIAVMEEGHLVEMGTHDELLNLDGLYAELLRCEEATKLPKRM
PTKNSRERKSLQIEDASVSQYFQESSSPKMAKSPSLQRTHGMLQFLRSDTVRNSHDSPKD
ISPPSEQTIDSGIPMVATETERTPSIKRQDSFEMKLPDLPKVDVHPIQRQSSKNSESDSP
ISPLLISDPKNERSHSQTFSRPQSERDDMSSEHSDLDEVQHHTPPSFWRLAGLSIAEWPY
ALLGTIGAAIFGSFNPLLAYTIALIVSAYYQIEVRDMHHEVNRWCLFIVGMGVITVLVNW
LQHFYFGIMGEKMTERIRRMMFSAMLRNEVGWFDKEENNADTLSMRLANDATFVRAAFSN
RLSIFIQDTAAVSVALLIGMLLGWRVALVALATLPVLVISAIAQKLWLAGFSKGIQEMHR
KASLVLEDAVRNIYTVVAFCAGNKIMELYRLHLDKILKQSLVHGLAIGFGFGLSQFLLFA
CNALLLWYTAISVDRQHLTIATGLKEYILFSFASFALVEPFGLAPYILKRRKSLMSVFEI
IDREPKIDPDDTTGLKPPNVYGSIEFKNVDFSYPARPEILVLSNFNLKVSGGQTVAVVGV
LGSGKSTIISLIERFYDPVSGQVLLDGRDLKSFNLRWLRSHMGLIQQEPVIFSTTIRENI
IYARHNATEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKN
APILLLDEASSAIESESSRVVQEALDTLVMGNKTTILIAHRAAMMKHVDNIVVLNGGRIV
EQGTHDSLMDQNGLYVRLMQPHFGKGLRQHRLM
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggtgccaactgggctgttcgggtgggcgtcgccgcacgtgcagccgctcacgcccgtg
tccgaggtgtccgagccgccggagtcgccgtcgccgtacggggacgggccggcgggggat
gcgggcgtgggggcgagggagggggaaggcgccggcgccggtgaggaggaggtggaggac
gacgaggtcgagccgccgccagcggcagtctcgttctggaggcttttcgagttcgccgat
gggttcgactgggcgctcatggctgctgggtcgctcgccgctgctgcgcatggcgcggcc
ctcgttgtgtacctgcactacttcgggagggccttgaatttgctcgactctgagcgagtt
gagtccgctctccatggacgcagcgatgagctgttccaccggtttaaggagcatgctttg
tatatcgtctatatagctgctggtgtttttgttgcaggatggatagaggtatcatgttgg
attctcactggggaacggcagactgctgtcatcagatcaaaatatgttcaggtcttgcta
actcaagacatgagcttctttgatacatacggaaacaatggtgatatagttagtcaagtg
ctcagtgatgtattgctcattcagtcagctataagtgagaaagtcgggaactacatacat
aatatggctacatttgttggtggtctcattgttggccttctcaattgttggcaaattgca
cttctaactcttgccactgggcccttgattgttgcagcaggaggaatatctaacatattc
cttcataggttggctgaaaacattcaagatgcttacgccgaagcggctagtattgctgaa
caggccatctcatacatcaggacactgtacgcttttacaaacgaaactcttgcaaagtac
tcctacgctacctcacttcaagccacactgagatatggcattttgataagccttgtccaa
ggaattggccttggatttacatacggacttgccatttgctcatgtgctttgcaactttgg
gttggaagacacctgattgctcgtggaaaagctgatggtggtgaagttgtggtagcttta
ttctctgtaattctgagcggccttggtttgaatcaagcagctacaaacttctattcattc
gagcaagggcgcattgctgcgtatagattatatgagatgattagccgttcaacttccagt
accaatcaagaagggatcaccttaccccaagtgcaggggaacattgaatttagaaatgtg
tattttagctacctgtctcgtcctgaaattccaattttaagtggtttcttcctcactgta
cctgctagaaaaactgttgcacttgttggtagaaatggctcggggaaaagcagcataatt
cctctaatggagagattctatgacccaacattaggggaagttcttttggatggggaaaac
ataaaaaacttgaaagtagaatggttaagaagccaaattggtctggtgacacaagaacca
gctttattgagtttgagcattcgggaaaacatcgcttatggaagatctgctacttttgat
caaatagaagaggcagcgaagacagcacatgcccataggttcatcagttcacttgaaaag
ggatatgaaacccaggttggtcaagctggcatagcactgactgatgaacagaagatcaaa
atttctattgcccgtgctgtgctttcaaacccatccattctcttgcttgatgaggtcacg
ggaggacttgattttgaagctgaaaaggctgtccaagaagcattagatgttctcatgttg
ggaaggtcaaccattataattgctagacgtcttagcctcataaaaaatgctgattacata
gctgtaatggaggaggggcatcttgttgaaatgggtacacatgatgaattgctgaacttg
gatggactttatgctgagcttttaaggtgcgaggaagcaacaaaacttcctaaaaggatg
cccaccaagaatagcagggagcgcaagtcactccaaattgaggacgcgtcagtgagccaa
tactttcaagaatcatcctctcctaagatggcaaaatcaccttcacttcaaagaacacat
ggaatgcttcaatttttgcgatcagataccgtcagaaactctcatgattcaccaaaggat
ataagtccaccttcagaacaaactatagacagtgggatacctatggttgcaactgaaact
gaaagaacaccgtccatcaagagacaggatagttttgaaatgaaattgcccgatcttccc
aaagttgatgtccatcctatacagcggcaatcatctaagaattcagaatctgactcgccc
atatctcctcttttgatttctgatcctaagaatgagcgttcacattcacaaacttttagc
agaccacagagtgaacgagatgatatgagctctgaacatagtgatctagatgaggttcag
caccacactcctccatctttttggcgacttgcaggacttagtattgctgaatggccttat
gctcttttaggtacaattggtgctgctatatttggctcgtttaatccacttcttgcttac
acaatagcacttatagtgtcagcatactatcaaatagaagttcgtgatatgcaccacgaa
gtgaacaggtggtgtttattcatagtaggcatgggtgttattacagtgctggtcaactgg
ttgcaacatttctattttggaataatgggggagaagatgactgagcgcataagaaggatg
atgttctccgcaatgctgcgcaatgaagttggatggtttgacaaagaggagaacaatgct
gatacactgtccatgcgcctggcaaatgatgctacatttgtccgcgctgccttcagtaac
cgtctttccatattcatacaagacactgctgcagtatctgtggctcttcttattggaatg
ttgttgggatggcgggtggcacttgttgcacttgcaactttaccagttcttgttatctct
gctattgcacagaaattgtggcttgcgggcttctcaaaaggaatccaggagatgcataga
aaggcttctttagtacttgaagatgcagtccggaacatatacactgtagtagcattctgt
gctgggaacaagataatggaactctacagattacatcttgataagatactgaagcaaagt
cttgtgcacggattggctataggcttcggcttcggtctctcgcagtttcttctttttgcc
tgcaatgccctacttctttggtacactgccatttcagtggaccggcagcatctgacaata
gccacaggactaaaagagtacattctcttttcatttgcatcatttgctttggtggagccc
tttgggcttgcgccttacatacttaaacggaggaagtctcttatgtcagtgtttgaaatt
attgaccgtgagccaaagattgatcctgatgataccactggcctgaaaccaccaaatgtc
tacggaagcattgaattcaagaatgttgatttttcttatcctgctcgccctgaaattctt
gtgctgagcaattttaatcttaaagtgagtggtgggcaaacagttgcagtggtgggggtt
ttaggatcagggaaaagcactattatttctttgatcgagagattctatgacccagtttct
ggccaagttctgctggatggtcgagatctgaaatcattcaacctgagatggttgcgtagt
cacatgggcctgattcagcaagagcctgttattttctcaacgacaataagagaaaacatt
atttatgcaaggcacaatgcaacagaggctgagatgaaggaagctgcgaggatagcaaat
gctcaccatttcattagtagcttgccacatggctatgacactcatgtgggaatgagaggg
gttgatctcacacctgggcagaaacaacggattgccattgctagggtggttttgaagaac
gcaccgatattgttgttggacgaggccagctctgctatcgagtccgaatcaagcagagtg
gtacaggaagctctcgacactttggtcatgggtaacaagacaacgattctcattgcacac
agggctgcaatgatgaagcatgtggataacattgttgtcctaaatggtggtaggatagtt
gagcagggtacacatgactctctgatggaccagaacggtctatatgttagattgatgcaa
ccccattttggcaagggccttcggcagcatcggctaatgtaa
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