Phragmites australis (common reed): 133916393
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Entry
133916393 CDS
T10575
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00541
Biosynthesis of various nucleotide sugars
paua01100
Metabolic pathways
paua01250
Biosynthesis of nucleotide sugars
Module
paua_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
133916393
Enzymes [BR:
paua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
133916393
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-GeneID:
133916393
NCBI-ProteinID:
XP_062216026
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Position
4:complement(38307647..38310960)
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AA seq
675 aa
AA seq
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MATYEPKNILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCSNLKNLNPSRPSPNFK
FVKGDIASADLVNYLLVTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGQIRRFVHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMRGLPLPIHGDGSNVRSYLYCEDVAEAFEVVLH
KGEVGHVYNIGTVKERRVIDVANDICKLFGLDTEKVIRFVENRPFNDQRYFLDDQKLKRL
GWAERTPWEEGLKKTIEWYTTNPYYWGDVTGALLPHPRMLMTPGVERHNWTEEIKSLASS
PAEAKESSTTAPATTTNSTSSAPQKPSYKFLIYGRTGWIGGLLGNICQKQGIPYEYGKGR
LEERSQLLQDIRNVKPTHVFNAAGVTGRPNVDWCESHKQDTIRTNVVGTLNLADVCREQG
LLMINYATGCIFEYDAKHTEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLR
VRMPISSDLSNPRNFITKIARYDKVVNIPNSMTILDELLPISIEMAKRDCRGIWNFTNPG
VVSHNEILEMYKKNINPDFKWTNFTLEEQAKVIVAPRSNNEMDASKLKAEFPELLSIKDS
LIKYVFEPNRKVPAN
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttatgagcccaagaacattctcataaccggtgctgcgggtttcattgcatcg
catgtggccaaccggctagttaggaactatccgcactacaagattgttgtccttgacaag
cttgattactgctccaacctaaagaacctcaacccttctcggccttcaccaaatttcaag
tttgtgaagggtgacattgcaagtgctgatctggtgaactaccttctcgtcaccgagtcg
attgacaccatcatgcactttgctgctcagactcatgtagataattcgtttggtaattcc
tttgagttcacaaagaacaacatatatggtacccatgtccttcttgaggcctgcaaggtt
actggtcagatcagaaggtttgttcatgtcagtactgatgaggtgtatggagaaactgat
gaggatgctgtggttggtaaccatgaggcctcacagttgctcccaacaaatccttattca
gctacaaaagctggggctgaaatgcttgtgatggcttatggaaggtcttatggtcttcct
gttattaccacccggggcaacaatgtgtatgggccaaatcaattccctgaaaaactcatt
cccaagtttattctcttggccatgagaggtcttcctcttccgattcatggagatggttct
aatgtcaggagctatctgtattgtgaggatgttgctgaagcttttgaggtcgttcttcac
aaaggagaggttggacatgtgtataatatcggcacggtgaaggagaggagggtgattgat
gtggccaatgacatatgcaaactctttggcttggatactgagaaagtcatcaggtttgtt
gagaacagacccttcaatgaccagaggtacttcttggatgatcagaagctaaagagattg
ggatgggcagagcgtacaccatgggaagagggcttgaagaaaacaatcgaatggtacacc
accaatccttattactggggagatgtcactggtgcattgctccctcatccaaggatgttg
atgacacctggagttgaaaggcataactggactgaggaaataaaatctctggcttcttca
ccagctgaagctaaggaatctagcacaacagctcctgcaaccactaccaacagcaccagc
agtgcccctcaaaagccttcgtacaagttcttaatatatggaaggactggatggattggt
ggcctccttgggaatatatgtcagaagcaagggataccttatgagtatgggaaaggacgt
ctggaggagcgctctcagctgttgcaggacattagaaatgtgaagcctactcatgttttc
aatgctgctggagtcactgggaggccaaatgttgactggtgcgagagccacaaacaggat
actatccgtaccaatgttgtaggcaccttgaatcttgctgatgtttgtcgtgagcaggga
ttgctcatgataaattatgctacaggttgtatatttgagtatgatgctaaacacactgaa
ggatctggaattggctttaaagaggaagacacgcccaacttcactggttctttttattcc
aaaaccaaagcaatggtggaagagctattgaaagaatatgataatgtctgcactcttaga
gtcaggatgcctatatcatcagatctaagcaatcctcgtaacttcattacaaagatagct
cgctacgacaaggtcgtgaacattcccaacagcatgacgattttggatgagcttctgccc
atctccattgagatggcaaagcgggactgcaggggcatatggaacttcaccaatccaggg
gttgtcagtcacaacgagattctggagatgtacaagaaaaacatcaatcctgacttcaag
tggaccaactttacactcgaggagcaggccaaggtcatagttgcacctagaagcaacaac
gaaatggacgcatcaaaactgaaggccgagttccctgagctgctgtccatcaaggattct
ttgatcaagtatgtctttgagccaaacaggaaggttcccgctaattga
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