Phragmites australis (common reed): 133916604
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Entry
133916604 CDS
T10575
Name
(RefSeq) nuclear pore complex protein NUP133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133916604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133916604
03036 Chromosome and associated proteins [BR:
paua03036
]
133916604
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133916604
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133916604
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
133916604
NCBI-ProteinID:
XP_062216331
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All DBs
Position
4:complement(42456005..42463073)
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AA seq
1289 aa
AA seq
DB search
MFSPAIRKPHLHRREREETSSSPRPPGPAHTPSTRGSAVLDRPATGTPAPWTSSSLLARI
STSKRTDRAGDSDQIQPVHVAEFPQVVRNAQASLLQKIFSGKNMLAGGIDKDTSLAWMIC
GNELFIWSYLASVAKDCLVLEVPSSLIGNKDAKSLSGFQWAVCIMRWHSSGAPTRNTEEI
LHRRSSTGVILCNKRAQAIAYWPDIYDESTRSPVPFGYGEASASDGASDCFRFNSIIASA
VPGGIHECIAIASEPAGALWLFQCSPAGIHQRKVHSDTLGDSGAEHSQKSNGGRSLAWLP
SNVSSESADRKFFLLANHEVQCWSISLLHGINVKKMWSQQIVGTDGDVSIKKDIAGQKNI
WILDMQIDEHGKEFSILVATFCKDRVSGSNYTQYSLLTMLFKPNKKFSSEDNVVKSEKFL
EKKAPSQVIIPKARVEDEESLFSVRLKTGGKPSGSVIILSGDGTATVAIYWRGSTRLYQF
DLPWDAGKVLDASVIPSAEDRDEGAWVVLTEKAGVWAIPEKAVLVGGVEPPERSLSRKGS
CNEAVAEEKRRTQVFSASVVPRRASSEAWSAGERQRPALTGITQQAVVDEESEMLLNRLF
HDFIIFGAGNEALQKLRAAGAFEKEGEMNIFVRMSKSIVNSLAKHWTTTREAEFLASTIV
SSLVEKQQKHEKFLQFLVLSKCHEELASKQRAAMLTIMEHGEKLSGMIQLRELQNTLSQE
RSGTHLSPQSKTQTTGALWNLIQLVGEKARRNTVLLMDRDNAEVFYSRVSDIEDLFYCLS
HQLQYIINREEHPSVQMQHTLELSNACITLVQAALCYREEHKEWYPSPEGLVTWNSHPVI
RSGIWSVAFFIMELLRESGAADMSMKSNLWSQLEGLTDILLEAYIGLLTAKFERGEEHGV
LVQEYCERRDELLGSLYNLAKQIVEAKYQESREGTSNLDLKESIFREVISPILATAKRHE
GYQTLWQICYDLSDTGLLRSLMHDSVGPHGGFSFFIFKELVNNRHYAKLLRLGEEFQEEL
GSFLKERSDLLWLHEIFLNQFSSASETLHMYALRGSPEEDANLTTSRKPLSFVERRRLLY
LSKIAATAGKDIDYEVKVARIEADMQILKLQEEIVQHDPLYAQGKYTNKLLDPSELVEMC
LNRDRELSLKAFEVFASKASFRSSNRGLLEACWMNAANQDDWVKLSEASTSEGWSDEVIQ
ESLQGTVLFNASRLCYSPDAVMYGGTFEDVLPVKKEDVHLRGLESKCFSVEEVLMQHKDF
PDAGKLMMTAVIMGKELSYAAAEPVDLDS
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgccggcgatcaggaagccccacctccaccgcagggaaagggaggagacgtct
tcttcacctcgtcctccaggtcccgcccataccccgtcgactcgtggatccgccgtcctc
gaccgccccgccaccggcactccggccccatggacctcctcctccctcctcgccagaatt
tcgacatcgaagcgaactgacagggctggtgattcggaccagatccaaccggtgcacgta
gcagagtttccccaagtcgttcggaatgcccaagccagccttctacagaagattttttct
ggcaagaacatgcttgctggtggcattgataaagacacatcccttgcatggatgatatgt
gggaatgaactttttatctggagctacttggcttctgttgcaaaagactgtcttgtactt
gaggttccatcttctcttattggaaacaaggatgcgaaatccctctctggctttcagtgg
gcagtttgcataatgagatggcacagtagtggtgcacctacaaggaacactgaagagata
ttgcatcgaagaagttcgactggtgttatcctctgcaacaaaagagcacaagctattgcc
tattggcctgacatatatgatgaaagtactaggagtccagttccctttggttatggtgag
gcatctgcaagtgatggtgcatcagattgtttcaggttcaactccattatcgcgtctgca
gttccaggaggtattcatgaatgtattgcaatagcatctgagcctgcaggtgcattatgg
ttattccagtgttcaccggcagggattcatcaaagaaaagttcatagtgatacattagga
gatagtggtgctgagcattcccagaaaagtaatggtggaaggtccttggcttggctacca
agtaatgtatcatctgagtctgctgaccgaaagttctttttgttggctaaccatgaggta
caatgttggagtatttcactcttgcatggcatcaatgtaaaaaaaatgtggtctcagcaa
attgttggtactgatggcgatgtgagcataaagaaagatatagctgggcagaagaatata
tggattttggacatgcagatagatgagcatggaaaggaatttagcatccttgttgctaca
ttttgtaaagatcgggtgagtgggtcaaactacactcagtattctcttttgacaatgctg
ttcaaacctaacaagaagttttcatctgaagataatgtggttaaaagtgaaaagtttttg
gagaaaaaagctccttcccaggtgataatccctaaggctagagtagaggacgaagaatcc
ttgttctccgtgaggctaaaaactggtggtaaaccttctggttctgtaatcatcctctca
ggtgatggaacagcaacagtggccatatattggagaggttctacccgactttatcagttc
gatctgccttgggatgctggaaaggtcttagatgcttccgttattccatctgctgaggac
agagatgaaggcgcttgggttgttctaacagaaaaggcaggagtctgggcaatacctgaa
aaggctgtattagttggtggggttgaaccaccagagcgcagcttatcacgaaaaggtagt
tgtaatgaagcagttgctgaagagaaaagaagaactcaggtcttcagtgccagtgttgtt
cccagaagagctagctctgaggcttggagtgctggagagaggcaaaggcctgcattaact
ggcataactcagcaagctgtggttgatgaagaatctgaaatgctactgaaccggttattt
catgattttattatctttggtgcaggtaatgaggcacttcaaaagcttagagcagcagga
gcatttgagaaagagggtgagatgaacatttttgttcggatgagcaaatccattgtaaac
tcattagctaaacactggacaacaactagagaagctgaatttcttgcctcgacaattgtt
tcatctcttgttgagaagcagcaaaaacatgagaaattccttcagtttcttgttttgtca
aagtgccatgaagaactcgcttcaaagcaaagagctgcaatgctaactatcatggagcat
ggagaaaagctgtctggaatgatacagcttagggaattacaaaacactcttagccaggaa
cgctcaggcacacatttatcacctcagtcaaaaacccaaactacaggtgccctttggaac
ctcattcaattggttggtgagaaagctcgaagaaacactgttctcttaatggatcgtgat
aatgctgaagtgttctacagtagagtttctgatatagaggatctgttttattgcttatct
catcagcttcaatacattattaatagagaggaacacccttctgttcagatgcaacacaca
cttgagttatcaaatgcttgtatcaccttagttcaggcagcattgtgctacagggaggag
cacaaggagtggtatccttctcctgaaggactggtaacatggaatagccacccagtcata
cgttctggaatctggagtgtagcattcttcattatggagcttttgagagaatcaggagct
gcagacatgtcaatgaagtccaatctatggtctcagctggaagggctcacagatattcta
ttggaggcatatataggtcttttaactgccaaatttgaacgtggggaggaacatggtgtg
ctagtccaagaatattgtgaacggagagatgaacttcttggatccctctacaaccttgca
aaacaaatagtggaggccaaatatcaggagtcaagagaaggtaccagcaatctggatctg
aaagaatccatatttagagaggttatttctcctattttggcaacagccaaacgacatgaa
gggtaccaaacattgtggcagatttgctatgatctcagcgatacaggtctcctccgtagt
cttatgcatgatagtgtgggacctcatgggggattcagtttcttcatttttaaagagcta
gtcaacaaccgacattacgctaagctgttaaggttgggtgaagaattccaggaagagtta
ggcagttttctgaaagagcgaagtgatcttctgtggcttcatgagatattcttaaaccag
ttctcatctgcttctgagacacttcatatgtatgctctgcgtggtagtcctgaggaagat
gctaacctcacaaccagcagaaagccgctgtcctttgttgaaagaagacgtcttctgtat
ctctctaaaattgctgcaacagcaggtaaagatattgattacgaagtgaaggttgcgcgg
atagaagcagacatgcagattctaaaactgcaggaagagattgtccagcatgatccatta
tatgcacaaggcaaatatacaaacaagctacttgatccatcagaactggttgagatgtgc
ctgaatagagaccgggagctctctcttaaagcttttgaagtatttgcttcaaaagcctca
ttccgaagctccaatagaggccttctagaggcatgctggatgaatgcagccaaccaggat
gactgggtgaagctttcagaggcatccacgtcagaaggttggagtgacgaagtcatccaa
gaatctcttcaaggaactgtccttttcaacgcttccaggctgtgttatagcccagatgca
gtgatgtatggcggtacttttgaggatgtgctgcctgtgaagaaagaggatgtacacctg
agaggtttggagagcaaatgcttctcagtggaggaagtgctgatgcagcacaaggatttt
ccagatgccggtaaattgatgatgaccgcagtgataatgggcaaagagctctcttatgca
gctgcagaacctgtggacttggattcatga
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