Phragmites australis (common reed): 133916611
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Entry
133916611 CDS
T10575
Name
(RefSeq) two-component response regulator ORR21-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
paua Phragmites australis (common reed)
Pathway
paua04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133916611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133916611
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
133916611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
133916611
NCBI-ProteinID:
XP_062216341
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Position
4:complement(42546897..42553161)
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AA seq
690 aa
AA seq
DB search
MAAADEARGGEFPVGMKVLVVDDDPTCLLVLKRMLLDCRYDVTTCPQATRALTMLRENRR
GFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVR
MEELKNIWQHVVRKKWSENKEHEHSGSLDDMDRNRPINTDNEYASSANDGGDGNCKSQKK
KRDKEEDEGDLENDDLSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPG
LTRENVASHLQKFRLYLKRIAQHHAGIPHPFVPSASSAKVAPLGGLEFQALAASGQIPPQ
ALAALQDELLGRPTSSLVLPGRDQSSLRFAAVKGNKPHGEREIAFGQPIYKCQNNAYGAF
PQSSPAVGGMPSFAAWPSNNKLGMTDSANALGNMNNSQNSSMLFHELQQQPDTFLSGTLH
SIDVKPSGIVMPSQSLSTFPAGDGLSPSQNPLVMPSQSSSFLAAIPPSMKHEPLLTTSQP
SSSLLGGIDLVNQASTSQPFISTHGGNLPGLMNRGSNATPLQGISNFQSGNNPYVVNQNA
VGVSSKPPGVLKTESNDSLRHSYGYMDGSTSMDSGLLSSQSKNAQFGLMQSPDDVNGSWS
PFQNVDSYGNTLGPGLPGSTSSNLQSSSVALGKLPDQGRGRNHGFVGKGTCIPSRFAVDE
IESPTNNLSHSIGSSGDIVNQDIFGFTGQM
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggatgaggcccggggaggggagttccccgtggggatgaaggtgctggtg
gtggacgacgacccgacgtgcctcctcgttctcaagaggatgctcctcgactgccgctac
gacgtgacaacttgtcctcaggctacaagagcattgactatgctgcgagagaataggcgt
ggttttgatgttataataagcgatgttcacatgcctgatatggatggatttaggttactt
gaacttgttggccttgagatggaccttccagttattatgatgtctgctgattcaaggaca
gatattgtaatgaaaggaataaaacatggagcatgtgattatttaataaagcccgtcaga
atggaggagttgaaaaacatctggcaacatgttgtaaggaaaaagtggagtgaaaacaag
gagcatgagcattcaggtagcctagatgatatggatcgtaacagaccaatcaatactgat
aatgaatacgcttcctctgcaaatgatggaggtgatggtaactgtaaatctcagaaaaag
aaacgagataaagaagaggatgaaggtgatctggaaaatgatgatctttcttctacatca
aagaaaccaagagttgtttggtcagttgagctccatcaacaatttgtaaatgctgttaat
caccttgggatagacaaagctgttcccaagaaaattttggagctgatgaatgtccctggc
ttaaccagggaaaacgttgccagccatttgcagaaattcagactgtatctgaagagaata
gctcagcatcatgcagggatacctcatccatttgttccttctgcttctagtgctaaagtt
gccccgttaggaggacttgaattccaagctttggctgcttcaggtcagatccctcctcag
gctctggctgctttgcaggacgagctcctaggtcgacctacaagcagtttggtgttgccc
ggaagggaccagtcatctttacgatttgctgcggtcaaaggaaacaagccccatggagag
agagaaatagcatttggtcaacccatatacaaatgtcagaacaatgcatatggggcattc
cctcaaagcagcccggcagttggaggaatgccatcttttgcagcttggcccagtaataac
aaacttggcatgacagattcagccaacgctttgggaaatatgaacaattcgcagaatagc
agtatgctatttcatgaattgcaacaacagccagatacctttctgtcaggaacccttcac
agtattgatgttaaaccttctggtatagttatgccctctcagtcactaagtacattccca
gctggcgacggtctctctcctagtcaaaatcccttggttatgccttctcaatcgtcaagt
tttctggcagccattcctccatccatgaagcatgaacctcttctgacaacttctcaacca
tcaagcagtctgttaggtgggatcgatcttgttaatcaagcttcaacaagtcagcctttt
attagtacccatggagggaatctccctggtcttatgaatcgtggctcaaatgcgacgcct
ttacaaggaattagtaattttcagagtgggaataatccatatgtggttaatcagaatgct
gtgggagttagctctaaaccaccaggtgttcttaagactgagagcaatgactcgttgagg
catagttatggctatatggatggtagcaccagtatggactccggcttactctcttctcag
tcaaaaaatgcacagtttggtttaatgcagagtccagatgatgtcaatggtagctggtca
ccatttcaaaatgttgatagttatggaaatactcttgggccaggcctccctggttccact
tcatctaacctccaaagttccagtgtggccctggggaaattgcctgatcaagggcgaggg
aggaatcatgggtttgtcgggaaaggtacttgcattccaagccgctttgcagtggatgag
attgaatctccaactaacaacttgagccatagcattggaagcagtggagatatagtgaac
caagacattttcggatttactggacagatgtga
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