Phragmites australis (common reed): 133916649
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Entry
133916649 CDS
T10575
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
paua Phragmites australis (common reed)
Pathway
paua03030
DNA replication
paua03420
Nucleotide excision repair
paua03430
Mismatch repair
paua03440
Homologous recombination
paua03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
paua03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133916649
DNA replication proteins [BR:
paua03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
133916649
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
133916649
MMR (mismatch excision repair)
133916649
DSBR (double strand breaks repair)
HR (homologous recombination)
133916649
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133916649
NCBI-ProteinID:
XP_062216405
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Position
4:complement(43312625..43316078)
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AA seq
622 aa
AA seq
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MEAAKSVTPGAVSLILANPSPDSAADVPEIVVQVVDLKSIGTRFTFMASDGKAKIKAMLP
THFAQEVRSGNLQNLGLIRILDYTCNAIASQLEKVLIITKCEVVSKALDADIKSEIKEEE
EHTIVLKPREEGVVVSKPISAPPVVLKPKQEVKSASQIVNEQRGNAAPAARLATTRRVHP
LISLNPYQGNWIIKVRVTSKGNLRTYRNARGGGCVFNVELTDEDGTQIQATMFNEAAKKF
YPMFELGKVYYVSKGSLRIANKQFKTVQNDYEMTLNESAVVEEAEGETFIPQVQYNFVKI
DQLGSYVNDRELVDIIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSGKTVTVSLWNDL
ATTTGQELLDMVDSSPVIAIKSLKVSDFQGVSLSTIGKSTLVINPDMPEAQELRSWYDTE
GQGTSMAPVGADMGAARAGGLRSMYSDRVFLTHITSDPTLGQDKPMFFSLNAFISHIKPD
QNMWYRACKTCNKKVTEAVGSGYWCEGCQKNDAECSLRYIMVIKVSDPTGEAWVSVFNEH
AERIIGCSADELDRIRKEEGDDSYILKLKAATWVPHLFRVSVAQHEYMGERRQRINVKSE
SPVDYAAESKYLLEEIAKLTAC
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgccaagtcggtgacgccgggcgccgtgtccctcatcctggcgaacccgtcg
ccggactccgccgccgacgtgccggagatcgttgtccaggtcgtcgacctcaagtccatc
ggtacccgtttcactttcatggcgagtgacgggaaagcgaagatcaaggcgatgcttccc
acccacttcgcgcaggaggtccgctccggcaacctccagaacctcgggctcatacgcatc
cttgattacacctgcaacgccatcgccagccaactcgagaaagtcttgattatcaccaaa
tgcgaggttgtgtccaaagcgctcgacgccgatatcaagagcgagatcaaggaagaagag
gagcatacgattgtcctgaagcccagggaagaaggtgtggttgtgtccaaacccataagt
gctcccccggttgtgctgaagccgaagcaggaggtgaaatccgcgtcccagatcgtgaac
gagcagcgtggaaatgctgctcctgcggcgcgcctggccacgacaagaagggtccatcct
ttgatctccctgaacccctaccagggtaactggatcatcaaggtgcgggtcacaagcaaa
ggcaacctcagaacttacaggaatgcccgtggaggaggttgtgtcttcaatgttgagctc
actgatgaggatggcacccagatccaggccaccatgttcaatgaggctgcgaagaagttc
tatccgatgtttgagctggggaaggtctactatgtctccaaaggatcacttagaatcgcc
aacaagcagttcaagactgtccagaatgactatgagatgaccctaaatgagagtgctgtt
gttgaagaagctgaaggggaaacttttattccacaggtgcaatataactttgtcaagatt
gatcaactaggatcatatgtcaatgacagggagctagtagatattattggtgttgttcag
agtgtgtcgcccacactgagtgttaggagaaagatcgacaatgagacaattccaaagcgt
gatattgttgtagcagatgactctggcaaaactgttactgtttctctttggaatgatctt
gctaccactactggtcaagagctcttagacatggttgacagttcgcctgtcattgcaata
aagagcctaaaagtatctgacttccaaggtgtgtctctttcaactataggcaaaagtaca
cttgtgattaacccagacatgcctgaggcacaggagcttagatcatggtacgacactgaa
ggccagggtacttcaatggcaccagttggtgcagatatgggtgcagcacgggctggtggc
ttgagatccatgtattctgatagagtttttctgacccacatcaccagtgatcctactttg
ggtcaggataagcctatgttcttcagtttgaatgccttcataagccacatcaagcctgac
cagaacatgtggtaccgtgcttgcaagacatgcaacaagaaggtgactgaagctgttgga
tctggatactggtgtgaaggatgccaaaagaatgatgctgagtgctcgctgaggtacatc
atggtcatcaaggtttctgatcccactggtgaggcatgggtctccgtcttcaacgagcat
gcagagaggatcattggctgcagcgcggacgagcttgatcggatcaggaaagaggagggc
gacgacagttacattctcaagctcaaagcagccacctgggttcctcatctgtttcgtgtc
agtgtcgcgcagcacgaatacatgggcgagagaaggcaacggatcaacgtgaagagtgaa
tcaccggttgactacgcagctgaatccaagtacctgctcgaggagatcgcaaaacttact
gcttgctag
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