Phragmites australis (common reed): 133916654
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Entry
133916654 CDS
T10575
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
paua Phragmites australis (common reed)
Brite
Enzymes [BR:
paua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
133916654
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
133916654
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GFIT
Other DBs
NCBI-GeneID:
133916654
NCBI-ProteinID:
XP_062216409
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Position
4:43354668..43375087
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AA seq
2086 aa
AA seq
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MLAPLPRLTSALRGHYDADQAYLLRKTVLQALILPRSHDEWELARKIVSGWDDASSEVRQ
AYKQFIGCVVELLNGEVASEELQQVAQAAYALFGGDDTEYDAAERALVKRNELECLVGYT
VQDSVLKKLAQLAQKLGSLQQASAHEFVQRKAEDVDENDRSEFGADFDFKPPGRFIVDVS
LDDGIPLESGGLGTEPFEKGQYDACGTSTARNSTAVRGSVSLRWLKDQCALITRSGGSML
SGDELAMALCRVLLSNKAGDEIAGELLDLVGDAAFEIVEDLLLHRKELVDAIQHGLMILK
SERMSTSNQPKMPTYGTQVTVQTEYERQLDKIRRKEEKRGKRGADHGTNDIGVDNFSSLL
LASERKQPLDDVIGTGEGADSFTVTSLPQGTTRKHMKGYEEVKIPPTPMASLKPNEKLIE
IRELDEFAQAAFQGYKSLNRVQSRIFQATYYTNENILVCAPTGAGKTNIAMIAVLHEVKQ
HFRDGILHKNEFKIVYVAPMKALAAEVTTTFSRRLSPLNLVVRELTGDMQLTKNEIEETQ
MIVTTPEKWDVITRKSSDMSLSMLVKLIIIDEVHLLNDDRGSVIEALVARTLRQVESMQS
MIRIVGLSATLPTYLEVAQFLRVNPETGLFFFDSSYRPVPLAQQYIGISERDYTKKNELF
NTLCYEKVVESIKQGYQALVFVHTRKDTGKTARTLIDLAAKAGELELFSSADHPQFPLIK
KDVSKAKSREVVEFFESGFGIHNAGMMRSDRSLMERLFADGLLKVLVCTATLAWGVNLPA
HTVVIKGTQLYDAKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITTHDKLAYYLRLL
TSQLPIESQFLGSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMKTNPLVYGITWEEV
IGDPSMGAKQRAFIIDAARALDKAKMMRYDEKSGNFYCTELGRIASHFYLQYSSVETYNE
MLRRHMSESEVITMVAHSSEFENIVVREEEQDELETLARKACPLEIKGGPTDKHGKISIL
IQVYISRAPIDSSSLHSDAQYISQSLARIMRALFEICLRRGWSEMSSLLLEYCKAVDRKI
WPHLHPLRQFDRDLSPQILWKLEERNVDLDRLYEMEENEIGALIRFSQQGKLVKQYVGYF
PYVNLSATVSPITRTVLKVDLRITPEFVWKDRYHGMSERWLIIVEDSENDTIYHSELFTL
TKKMARGIPTKLSFNIPIFEPHPPQYYIRAISESWLHAESLFTVSFHNLTLPQTKITHTE
LLDLKPLPLSALGNKTYEDLYRFSHFNPIQTQAFHVLYHTDNNVLLGAPTGSGKTVSAEL
AMLHLFNTQPDMKVVYIAPLKAIVRERMNDWRQRLVTQLGKKMVEMTGDFTPDLMALLSA
DIIISTPEKWDGISRSWHSRSYVMKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTE
RSIRFVGLSTALANACDLADWLGVTDDGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSM
NKPAYAAICTHSPNKPVLIFVSSRRQTRLTALDLIQLAASDEKPRQFLNMVDNSLDMVLT
QVSDTNLRHTLQFGIGLHHAGLNDRDRSLVEELFSNNKIQVLVCTSTLAWGVNLPAHLVI
IKGTEYYDGKTKRYVDYDITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPF
PVESNLREHLHNHINAEIVSGTISNKEEAIIYLTWTYLFRRLVVNPAYYGLEDVETNTLN
SYLSRLVETTFEDLEDSGCIRVDDHSVKYLILGKIASQYYLSYLTVSMFGSNIGPNTSLE
TFVHILSAAAEFDELPVRHNEDNLNRTLSGMVPYSVSQHHLDDPHVKANLLFQAHFSRAE
LPISDYVTDLKSVLDQSIRIIQAMIDICANSGWFSSALTCMHLLQMIIQGLWFERDSSLR
MLPSMNDNLLDHLKGRGVSTVPALLDLSREELHILLQPFDASKLYKDLQHFPRVDVKVKL
QTEEKMQSKPSTLNIRVQLKNSRRSTSRAFAPRFPKAKQEAWWLVLGNASNSELYGLKRI
SFADRVVNTRMELPQMFNIQETKLILVSDCYLGFDLEFSLEHLTKG
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgccgctcccgcgcctgacgagcgcgctccgcggccactacgacgccgaccag
gcctacctcctccgcaagaccgtcctccaggccctcatcctccccaggtcgcatgacgag
tgggagctcgcgcggaagatcgtgtctggctgggacgacgcttccagcgaagtgcgccag
gcgtataagcagtttattgggtgcgtggtggagttgttgaatggggaggtggcctctgaa
gaactccagcaagttgctcaggctgcgtatgccctgtttggtggcgatgacacagaatat
gatgccgccgaaagagcccttgtgaaaaggaatgaattggaatgccttgtgggctacact
gtacaagattcagttttaaagaagctagctcagttagctcagaagcttggttcccttcaa
caggcaagtgcccatgaatttgtccagagaaaagcggaggatgtagatgaaaatgataga
agtgaatttggagcagactttgatttcaagccacctggtcgtttcattgttgatgtttct
cttgatgatggcatacccttagaaagtggtggattgggcactgagccatttgaaaaaggg
cagtatgatgcttgcggcacatccacagctcgtaattcaactgctgttaggggttctgtg
agtttgaggtggctaaaagatcaatgcgctttgataactagaagtggtggctcaatgctc
tcaggagatgaacttgcaatggctttgtgccgagtgctcctatcaaataaagcaggagat
gagatagctggtgaactgttggacctggttggcgatgctgcctttgaaatagttgaggat
cttcttttgcataggaaggagctagtagatgcaattcaacatggattgatgatattgaaa
tcggagagaatgtccacaagcaatcaaccaaagatgccaacttatggcacacaggtaact
gtacaaacagaatatgagcgtcagcttgataagattaggaggaaagaggaaaaacgtggc
aaacgtggtgcagaccatggcactaatgatattggcgttgataatttctcatccctcctt
ctggcaagtgaaagaaaacagccattggatgatgtgattgggactggagaaggggcagat
agttttacagtaacttctcttcctcaaggaaccacaaggaaacacatgaaggggtatgaa
gaagtgaaaattccacctactccaatggcatcactgaaacccaatgagaagctgattgaa
ataagagagttagatgagtttgcccaagctgccttccagggatacaagtcgctcaatcgt
gtgcagagtcgtattttccaagctacttactacaccaatgagaatattctagtttgtgct
ccaacaggtgctggcaaaacaaatattgcaatgattgcagttctacatgaggttaaacag
cacttcagggatggcattttgcataaaaatgagtttaagatagtttatgttgctccaatg
aaggccttggctgcagaggtgacaacaacattcagtcgccgattatctccattgaacctg
gttgttagagaacttacaggagacatgcagttgaccaaaaacgagattgaagaaacacag
atgatagtgactactcctgagaagtgggatgtcattacacgcaaaagcagcgacatgtca
ctgtcaatgctggtcaagctgataatcattgatgaagtgcatctgctaaatgatgataga
ggttcagtaattgaggcactagtagctcgtactcttcgccaggttgagtctatgcaatca
atgattcgcattgttggcctatctgctaccctgcctacttacttagaggttgcacaattt
ttgcgggttaatccggagactggccttttcttttttgactcaagttaccgtccagttcct
cttgctcagcagtacattgggatcagtgaaagggattacactaagaaaaatgaactattc
aatactttgtgctatgagaaggttgtggagtccattaagcaaggctaccaagcattggtt
tttgttcatactcgtaaggatactgggaaaactgctagaaccctgattgacctagctgca
aaagcaggggaactggaactattttcaagtgcagatcatccccaatttccattaatcaag
aaagatgttagtaaagcaaaaagtcgtgaagttgtagaattttttgaatctggatttggc
atacataatgctggaatgatgcgttctgacagaagtttaatggagcgcttgtttgctgac
gggcttctgaaagtccttgtttgtacagcaacattggcttggggagtaaacttaccggct
catacagttgttataaagggcacacaactatatgatgctaaagctggcgggtggcgagat
ctggggatgcttgatgtgatgcagatcttcggacgtgctggaaggccacagtttgataaa
agtggtgaagggattattatcacaacacatgacaaattggcttattacttaagattattg
acaagtcagcttccaatagagagccagttccttggatctttgaaagataatttaaatgct
gaggttgccttgggcactgtgacaaatgtcaaggaggcctgtgcctggcttggctataca
tacttatttataaggatgaagactaatcctctggtgtatgggataacttgggaagaggtt
attggagatccttctatgggcgccaagcaaagagcattcattattgatgctgcacgtgcg
ctagacaaagctaagatgatgcgctatgacgaaaagagcggcaacttttactgcacagaa
cttggtcgaattgcaagccacttttaccttcagtactccagtgttgagacttacaatgag
atgcttcgacgtcacatgagtgaaagtgaggtgattactatggtggcccattcctctgaa
tttgaaaatattgtagtaagagaagaagaacaggatgaattagaaacccttgccaggaaa
gcgtgcccgttggaaattaagggtgggccgactgacaaacatgggaaaatttcgattctt
atacaggtttatatttcccgtgctccaatcgatagctcctctttacattctgatgctcaa
tacattagtcaaagtttggctcgcattatgagggcattatttgagatttgtctgcgtcga
gggtggtctgagatgtcatccttattattagaatattgtaaggccgtggaccgcaaaata
tggccccatctccatccacttaggcagtttgatagggatctttctcctcagatattgtgg
aaacttgaggaaagaaatgttgatctggatcgtctttatgagatggaggaaaatgaaatt
ggagctctgatccgtttttctcaacagggaaagttggttaagcaatacgttggatacttc
ccatatgtcaacttatctgctactgtgagcccaatcactaggacagttcttaaagtggac
cttcgtataactcctgaatttgtgtggaaagatcgttatcatggcatgtcagaacgatgg
ttgattatcgttgaggattctgaaaatgataccatttatcattcagagctattcacacta
acaaagaagatggcgagaggaatccctacaaagctatcttttaatataccaatatttgaa
cctcatccaccacagtactatatacgagccatatcggagtcatggttacatgctgagtca
ctctttaccgtttcttttcataatctgaccttgccacagacaaaaataacacacactgaa
cttttggacttgaagcctcttccactgagtgctcttggcaataaaacgtatgaagatctg
tacagattttctcatttcaatccaatacaaactcaggcttttcatgttctctatcacacc
gataacaatgtactcttgggagctccaacagggagtggcaagacagtttctgcagaacta
gcaatgcttcatctattcaatacacaaccggacatgaaggtagtttacattgctcctcta
aaagctatagtgcgagaaagaatgaatgattggagacaacgtcttgtaactcaacttggg
aagaagatggttgagatgactggtgacttcactccagatctgatggccctattatcagct
gacatcataatttctacccctgaaaaatgggatgggatcagtcgaagttggcatagtaga
agttatgttatgaaggttgggctaatgattttggatgagatacatcttctgggagctgac
cgtgggcctatccttgaggtcattgtatcaagaatgcgatacatatcatcacaaacagag
cgttcaattcggtttgttggtttatcaacagcattagcaaatgcttgtgatttagctgat
tggttgggcgttacggatgatggtctattcaatttcaagcctagtgtgaggcctgtacct
cttgaagtgcatatccagggatatcctgggaaattctactgtccgagaatgaatagcatg
aacaaaccagcatatgcagccatatgcactcattcacccaataaaccagttctcattttt
gtgtcatcacgtcgacaaacaagacttacagctcttgatctcattcagcttgcagcatca
gatgaaaaaccaaggcagttcctgaacatggtggataactccctagacatggttcttaca
caagtttctgacactaatttgagacatactctgcaatttggcataggtctgcatcatgca
ggtttaaatgatagagacagatccttggttgaggaactcttttcaaacaacaagattcag
gtactggtgtgcactagcacattggcctggggtgtcaaccttccagcccacctggtcata
atcaagggcactgagtactatgatggcaaaacaaaacgatacgttgattatgatattaca
gatattctccaaatgatgggtcgtgcaggtcgaccacaatatgaccagcatggcaaagct
gttattcttgttcatgaaccaaaaaaaagcttttacaaaaagttcctctatgaaccattt
cccgtggaaagtaatctgagggaacacttgcacaatcacataaatgcagagattgtttcc
ggaaccatcagcaataaggaggaggcgattatttatctcacttggacttacctatttcgc
agactggttgttaatccagcttactatggattggaggatgttgaaacgaacaccttgaat
tcttatctctcgaggttagtcgaaactacatttgaagatcttgaggatagtggatgcata
agagtggatgaccactctgtgaagtacttgattttggggaaaatagcttcacagtattac
cttagttaccttactgtttcaatgtttgggtcaaatattggtcccaacacatcattggaa
acctttgtgcacatactgtcggctgctgctgaatttgatgagcttcctgtacgccacaat
gaggataacttgaatcgaacactcagcggaatggtcccatattcagttagtcagcaccac
cttgatgatccgcatgttaaagccaacttactctttcaggcgcatttctccagagcagaa
ttaccaattagcgactatgtcactgacttgaaatcagttcttgatcagagcatacgaatt
atacaggccatgattgatatatgtgccaatagtggatggttttcaagtgcattgacatgc
atgcatctcttgcaaatgatcatacagggcctctggtttgagagggactcatcactccgg
atgttaccatccatgaatgataatcttctagatcatctcaagggtagaggagtctcaaca
gtcccagccttgttggatctttcccgtgaagaattgcacatcctacttcaaccattcgat
gcgtcaaagttgtataaggatctgcaacatttccctcgtgttgatgtaaaagttaagctt
cagactgaagagaagatgcagtccaaaccttcaactttaaacatcagggtacaattgaaa
aattcacggcgttcaacatcgagagcatttgcccctagattccccaaggcaaaacaagaa
gcttggtggctggtcttggggaatgcttcaaattcagagctgtatggtctgaaaagaatt
agttttgcagatcgtgtggttaacactcgcatggaattgccacagatgttcaatatccag
gagacgaagctgattttggtgtcggattgctatctagggtttgacttggagttttctctt
gagcatctcaccaagggttga
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integrated database retrieval system
