Phragmites australis (common reed): 133916761
Help
Entry
133916761 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase SPL2-like isoform X1
KO
K15688
E3 ubiquitin-protein ligase MUL1 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133916761
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133916761
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133916761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDE
zf-C3HC4_3
Prok-RING_4
zf-RING_2
Importin_rep_6
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
133916761
NCBI-ProteinID:
XP_062216570
LinkDB
All DBs
Position
4:45214147..45217522
Genome browser
AA seq
383 aa
AA seq
DB search
MSARDRETAEALVRFAAALDGAVLGLGTAAVAIVSWVKYLAVSGELRLVASATTAAIADL
GSLLPGEGGEPRLAAVRGYVRPAPRGTIIAPPGSGEHCVVAKHTQMCLFTEWRGIFGWTF
DLHALLFRSWKEQIITSFRYVPFVLASSEFGNSIGMVYVNLDKADQPLPLTTVHHKLIPI
ETSPYTLFHTIIGNGYPIALLDEEKILPIGKEITAIGLCRTNKGSVEIGSCPEIPFFFSK
LFNALPLLRSELTKDEMQAELTSRARTLFWASIVFGALSVCLVGHAIYRGWVRIKLRREA
RQAQQLFEEAEDAIQEDDSSDEDEIGDRQLCVVCLRKRRRAAFIPCGHLVCCCKCALRME
REVEPLCPMCRQDIRYMMRIYDS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcgggaccgcgagacggccgaagcgctcgtgcgctttgccgccgcgctggac
ggggccgtgctcggcctcggcacggcggccgtcgccatcgtgtcgtgggtcaagtacctc
gcggtctccggggagctgcggctcgttgcctccgcgacgacggccgccatcgctgacctc
ggctccctccttccaggcgaaggcggcgagccacggctcgcggcggtccggggctacgtg
cgccccgccccccggggcacgatcatcgcgcccccgggctccggcgagcactgcgtcgtc
gccaagcacacccagatgtgcttgttcacggaatggagaggcatctttggttggaccttt
gatctgcatgctctcctttttaggtcatggaaagagcaaatcataacatcttttagatat
gttccgtttgttcttgccagttctgagttcggaaactcaattgggatggtatatgtcaat
ttagataaggcggatcaaccattacctcttacaactgtgcatcataaacttatcccaatt
gagacatctccttacacattgtttcatactattattggcaatggctatccaattgcgtta
ttggatgaagaaaaaattcttcctattggcaaggaaattacagcaataggactatgtcga
acaaataaaggaagtgttgagatcggctcgtgcccagagattccctttttcttttccaag
ctttttaacgccttgcctttgctcagatctgagctgaccaaggatgagatgcaagctgag
ctgacttcgcgtgccagaacactcttttgggcaagtattgtttttggagccttgtcagtt
tgcttagtgggccatgctatttataggggctgggtgagaatcaaactgcggagggaggct
aggcaagctcaacaattatttgaggaggctgaagatgctattcaagaagatgactctagt
gacgaagatgaaataggagacaggcaattatgtgttgtgtgcttaaggaagagaagaaga
gcagcttttattccttgtgggcatcttgtctgctgttgcaaatgtgcattaagaatggaa
cgtgaggttgaaccattgtgccctatgtgtcggcaggacatcagatacatgatgaggatt
tatgactcttga
DBGET
integrated database retrieval system
