Phragmites australis (common reed): 133916808
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Entry
133916808 CDS
T10575
Name
(RefSeq) protein ALTERED SEED GERMINATION 2-like isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
paua Phragmites australis (common reed)
Brite
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
133916808
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GFIT
Other DBs
NCBI-GeneID:
133916808
NCBI-ProteinID:
XP_062216645
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Position
4:45685876..45696254
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AA seq
745 aa
AA seq
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MDATEQLRWRFSDGSVTDLLNARSLHGSPDIKKKVQFHSSLVQKLALEKEMEGHIGCVNA
ISWNSTGSLLISGSDDTRINIWSYNNRELLHDIDTGHSANIFCTKFVPERCDEVVVSGAG
DAEVRVFNMSRLSGRRPREISMEPEAVYQCHSRRVKKLAVEIGNPNVVWSASEDGTLRQH
DFRECSSCPRAGSANQECRNVLLDLRCGAKKSLADQPRQPLALKSCDISSVRPHQILVGG
SDAFARLYDRRMLPPLGSCQTKRKPPPCVKMFCPLHLADSKKTYLHLTHVAFSPNGKEVL
LSYSGEHVYLFDVDPDNMSSVRYTADYVREQLFAPPFHKEPAKQQKFSVNTASRNLCRVD
MCRKLMQVAIKSLETSTNLMHGIEACSEVLESVRPDVDDDMRHDCFCTRAGLYLKRKWKN
DVYMAIRDCNRARNIDPTSYQAHLYMAEALLQLGRLKEASEYAEAANSLLPPYSQLRKQV
DDIKQRVASAEEEKNRMDQNGNAKADRQRGKLRSLSDILLRSDVSGSSSQEGREDSDYDD
EMELDYETSVSGDERRENDQGVFQGSLSFRFHQRDDQTNEHTGENGSVESNHNDDSAFLS
EVAIDMKQRYVAHCNVGTDIKQASFLGEQGEFIASGSDDGRWFIWEKRTGRLIKMLAGDG
AVVNCIQSHPFDCAVATSGIDTTIKLWTPDASATSMVAGPELDVLSAIENNQQKLCRNRQ
ILLPFEFLERFRMHEFAEGFECAQS
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgacggagcagctgcggtggcgcttctcggacggcagcgtcaccgatcttctc
aacgcccgcagcctccatggctcccctgacattaagaagaaagtacaatttcattcttct
ctagtgcaaaagcttgctttggaaaaggagatggagggtcacataggttgcgtgaatgcc
atctcatggaattcaactggctcacttctcatatcaggatcagatgacactagaattaac
atctggagttataataatcgagagctgttgcatgatattgacaccggacattcggcaaat
atcttctgcacaaaatttgtcccagaaagatgtgacgaagtagtagtctctggagcagga
gatgcagaggttcgtgttttcaatatgtctcgtttaagtggtagaaggcctagagaaatt
tctatggaaccagaggcagtttaccagtgtcactcaagaagggtcaagaaactagctgtt
gaaattggcaatcctaatgtagtgtggagcgcaagtgaggatggtactctgagacagcat
gattttcgggagtgtagttcctgccctcgtgcaggatctgctaatcaggaatgccgtaat
gtgcttcttgatctacgatgtggagctaagaagtcattagctgatcaacccagacaacca
ttggcactaaagtcttgtgatattagctctgttcgtccccatcaaatccttgttggtggg
agcgatgcatttgctcggctgtacgataggagaatgcttccgccattgggctcatgtcaa
accaaaaggaagccaccgccatgcgttaaaatgttctgcccgttgcatcttgctgacagt
aagaagacatatttgcaccttacacatgttgcatttagcccaaacgggaaggaggttctt
ttaagttacagtggtgaacatgtttatctctttgatgttgatccagataatatgagttca
gtgagatacacagctgattatgtacgagagcaactatttgcacccccttttcacaaagaa
ccagcaaaacaacagaagttttcagtaaacacagcttcaaggaatttgtgtagggtagat
atgtgcaggaaacttatgcaagttgcgataaaatctctggagacgagcactaacttaatg
catgggattgaagcatgcagtgaagtacttgagtcggtcagacctgatgttgatgatgac
atgaggcacgattgcttttgtactcgggcaggactgtacctaaagaggaagtggaaaaat
gatgtttacatggcaattcgagattgcaacagagcgcggaatattgatcccacatcctat
caagcacatttatatatggcagaggcactattacagttaggaagactgaaggaggcatct
gagtatgcagaagcggcaaatagtcttcttccaccttattctcaattgaggaagcaggtt
gatgatataaagcagcgtgttgcttcagctgaagaagagaaaaatagaatggatcagaat
gggaatgctaaagctgatagacaacgtggaaaattacgctcattgagtgatatattgttg
agatccgatgttagtggttcttcatcacaggagggacgagaagattcagattatgatgat
gaaatggagttagactatgagacatcagtatcgggtgacgaacgtcgtgagaatgatcaa
ggtgtctttcagggtagtttaagtttcagatttcatcaaagagatgatcaaactaatgaa
cacactggtgagaatggatcggttgagtccaatcataatgatgattccgcctttctgtcg
gaagttgccattgatatgaaacaaagatatgttgcacactgcaatgtggggacagatata
aaacaagctagctttcttggtgagcaaggggagtttattgccagcggaagtgatgatggt
aggtggttcatatgggagaagagaacaggaaggcttattaaaatgcttgcaggggatgga
gctgttgtgaactgcatacagtctcatcccttcgattgtgctgttgcaacaagtggaatt
gatactacaataaagctatggacacccgatgcaagtgctacatctatggttgctggacca
gaacttgatgtgttgagtgccatagagaataatcagcagaagttatgtcggaaccgtcaa
attttgctgccttttgaatttttggaacgatttcggatgcatgagtttgctgaaggtttt
gagtgtgcgcagagttga
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