Phragmites australis (common reed): 133916861
Help
Entry
133916861 CDS
T10575
Name
(RefSeq) protein CHROMATIN REMODELING 35-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
paua Phragmites australis (common reed)
Pathway
paua03440
Homologous recombination
Brite
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
133916861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
133916861
NCBI-ProteinID:
XP_062216719
LinkDB
All DBs
Position
4:complement(46399449..46414868)
Genome browser
AA seq
951 aa
AA seq
DB search
MGFRWMDLASNKRQKHGNEQTNSPGTQFQSSILSNNRRVCLQFLEQYNELKYGSVTKGLE
AIHIKRRELIGILEKLQQVPIRLPYSSPVLKSSDATLYNFGQSGSNYSSANIIDLDADED
NFGDDNYANVGNTGADATFLAVDSDIEDGVQSFGGENSPSKQHENFIQQQLLPEQPVEHQ
EIIILDNVNSSTEPQVSVKRGKDIMDPDNVSDKPNKIALFDSDSTSVQQSLIKQGHGHIK
TTNEQSHHKEKGKIEKTIEKDIDSYEVSSEVVQTEPQSNGINHHDKGSPVDELEDLWRDM
SVALACSKTIGSNQSIVPSEKNTCEEMEDACNHDFLMKDDLGIVCRVCGLIEQRIENTFE
YSWKKRKQSYKTYPSEHRNSSDPDATGNPSAMVLKVVPDTLSIHPQHSQHMKPHQMEGFN
FLIKNLADENNPGGCILAHAPGSGKTFMLISFVHSFLNRYPAGRPLIVLPRGILGTWKSE
FLRWQVENIPLYDFYSSKANNRSEQLKVLKLWEEYRSILLIGYQKFEHIVSDDSSDSEAI
MCREKLLKVPSLVILDEGHTSRNDQTELLSALETIQTPRKVVLSGTLFQNHVSEVFNILN
LVRPKFLKMQKSRAIMKRILTKVDMLGKSVRAKNISEKVFYELIEENLQKDSKTMKVMII
QNLRELTKNVLHYYQGEILKELPGLVDFTVLLNMSTKQDNIIKGLVGTNKFEAHAKCNAV
SLHPCLKDVKNVDKKNRNISKRKMELIIRGIDINDGVKAKFIYNLLSLSEAAGEKVLVFS
QYVRSLDFLETLVTKMKGWKSGVNTFQMNGGLTNDQREQAVERFNNSPDAKVFFGSIKAC
GEGISLVGASRVVILDVHENPAVMRQAIGRAFRPGQSKMVYCYRLVAAGSLEEEHHNTAF
KKERVSKLWFEWNELSSNEDFELAEVDVSGTEDRFLESPALREDIKSLLKR
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcagatggatggatcttgcaagcaacaaaaggcagaagcatggcaatgagcaa
actaattcaccaggcacccaattccagtcaagcatcctcagtaataatagacgtgtctgt
cttcagtttcttgagcaatacaatgaattgaagtatgggagtgtcaccaaaggcctcgag
gcaatccatatcaagcggcgtgaacttattggcatcttagaaaagctacagcaagttcct
atccgactgccctattccagtccagtcctgaaatcatcagatgcaacattatataacttc
gggcaaagtgggagcaattacagttcagctaatatcatcgacttggatgcagacgaagac
aattttggagatgataactatgctaatgtggggaacactggggctgatgcaacattttta
gcagtcgattctgacatcgaggatggggtacaatcctttggaggtgagaattcaccttct
aagcaacatgaaaattttatccaacagcagttgctgcctgagcagcctgttgaacatcaa
gaaatcatcattctggataatgtgaatagcagtactgaaccacaagtttcagttaagcga
ggaaaggacatcatggatcctgacaatgtttctgataagcccaacaagattgctctattt
gatagtgacagtacttcggtgcagcagtcattgatcaagcaaggacatggccatattaaa
actactaatgagcagagtcatcataaggagaaaggaaagattgaaaaaaccatagagaaa
gatattgattcttatgaagtatctagtgaagttgtacaaactgaaccacaaagcaacggt
attaatcaccatgacaaaggcagcccggttgatgagctggaagatctttggagggacatg
tcagttgcattggcatgttcaaagaccattggaagtaatcagagtattgttccatcagag
aaaaacacttgtgaggaaatggaggatgcatgtaatcatgacttcttaatgaaagatgat
ttgggcattgtgtgccgtgtttgtggtctcatcgagcagcgcattgagaatacttttgag
tactcatggaaaaagcgcaagcaatcttacaaaacatacccctcagaacatagaaactct
agtgatccggatgcaactggcaatccttcagcaatggttctcaaagttgtccctgatact
ctgtcaatccaccctcaacattcacaacatatgaaacctcaccagatggaaggtttcaat
ttcttgatcaagaacttggcagatgagaacaatccaggagggtgtattctagcacacgcg
cctggttctgggaagacctttatgctcatcagtttcgtccacagcttcctgaaccggtac
cctgctgggaggccattgattgtgcttccaaggggtattctgggaacatggaaaagcgaa
tttctccgttggcaagttgagaacattcctttgtatgacttctactcctccaaagctaat
aaccggtctgagcagctcaaagttttgaaattgtgggaagaatacagaagcatattgctg
atcggttatcagaaatttgaacacatagtttctgatgactcttctgatagtgaagccata
atgtgcagagagaagctgctgaaggtccctagccttgtaattctagatgaaggccacacc
tcgagaaatgaccaaacagaactgctcagtgcacttgaaactattcaaactcctcgaaaa
gtggtgctctcaggaaccttgtttcagaaccatgtaagtgaggttttcaacattttgaac
cttgtccgacccaaattcttgaagatgcagaaatctcgtgcaatcatgaagcgtatacta
actaaggtggacatgctagggaagagtgtacgagcaaaaaacatctcagaaaaggtcttc
tatgaattgattgaagagaaccttcagaaggattcgaaaacaatgaaagtgatgattatc
cagaatctacgcgagctaactaagaatgtgctccactattaccaaggtgagatcttgaag
gagctacctggacttgtggatttcacagttttgctaaatatgagtaccaaacaggacaat
atcatcaagggtttggtaggaacaaataaatttgaagcacatgcaaaatgcaatgctgtt
tctcttcatccatgcttaaaggatgtcaagaatgttgataagaaaaatagaaacatcagc
aaaaggaagatggaattaatcatacgtggaatcgatatcaatgatggggtgaaggcaaag
ttcatatacaatctgttgtctctttcggaagctgcgggagagaaggtactcgtgttcagc
cagtatgtgcgctctcttgatttcttggaaacgctggtcaccaaaatgaaaggatggaaa
tcaggagttaacactttccagatgaatggtggtttaactaatgatcagcgagagcaagca
gtcgagagattcaacaactcaccagacgctaaagtcttcttcggttccatcaaggcgtgc
ggggaggggatctccctcgttggagcatcacgtgttgtcattttggatgtccatgagaat
cctgctgtgatgcgccaggcgatcggacgggcattcagaccagggcagtctaaaatggtg
tactgttaccgcctcgtcgccgctggctcactggaggaggagcatcacaacacggccttc
aagaaagagcgggtgtcaaagctgtggttcgagtggaatgagcttagcagcaatgaggat
tttgagctcgccgaggtggatgtttctggcaccgaggacagatttctggaaagccctgca
ctgcgagaagatatcaaatccctattgaaaaggtga
DBGET
integrated database retrieval system
