KEGG   Phragmites australis (common reed): 133916891
Entry
133916891         CDS       T10575                                 
Name
(RefSeq) protein RRP6-like 1
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
paua  Phragmites australis (common reed)
Pathway
paua03018  RNA degradation
Brite
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     133916891
SSDB
Other DBs
NCBI-GeneID: 133916891
NCBI-ProteinID: XP_062216755
LinkDB
Position
4:complement(46884272..46890546)
AA seq 714 aa
MDGSEGVGGREEEAGDGFQLVVHGKKKKRASGQEGGSTGSDAILGSGSVRALTKDKAAAP
GTKAKVPFHDPSIPRPQDVYKIIVDNYNPFEHVWLERSEDGTRPVHPLEKLPVEQFIDRN
VPESEPVKPADLDDTPFTLVEDKEGLKELAIKLKSVTEFAVDLEHNQYRSFQGLTCLMQI
STRTEDFIVDTLKLRIYIGLYLKEYFKDPTKRKVMHGADRDIMWLQRDFNIYVCNLFDTG
QASRVLQMERNSLEHLLHHFCGVTAKKEYQTADWRPRPLPDEMIKYAREDTHYLLYIYDL
MRQRLQRESTFENDLLLEVQKRSNEICLQFYEKELLTDTSYLHIYRLQEHELNAKQLAVV
AALHKWRDHIARQEDESTGYVLPNKALIEIAKQMPTDTGHLKRIVKSKYPFVESSLDLIM
YIVWNAPEYSYAYEAIAEQLKKERLEQLALESVQASDAMTALDAEDKSNFDPADQSSVAP
LSTANVNVASGSRASFMSEASLIGSLHLDDKTRAISSSETRTSQTLSGLIRPMNKEVLSN
NRYQQAFQELKRPTLGALMGNSASGRRSEIFGGFSNEQGGSNVEKLLPFQQLSGGVKRSA
TIVPTESSYPNQGMHSDNFWIQSTQMNEVMQLGNTTYYPQLPGYNTEVVGSHYKPEGTQM
PSYLSGFDPGFQSINQRSTGTGQPPGRNKEGSFQSPMRRQSFPPSGNRYDSTYQ
NT seq 2145 nt   +upstreamnt  +downstreamnt
atggacgggtccgaaggcgtaggggggagggaggaggaggcgggggacgggttccagctg
gtggtgcatggtaagaagaagaagagggccagcggccaggagggtgggagtactggctct
gatgccattctcggttccgggtcggtgagggcgttgaccaaggacaaggcggccgcgccg
gggacgaaggcgaaggtgcccttccacgatcccagcattccccggccgcaggatgtgtac
aaaatcatagtggacaactacaatccattcgagcatgtctggctagagcgcagcgaagac
ggcacccgacctgttcacccgctggaaaaactgcctgtcgaacagttcattgatagaaat
gttcctgagagtgaaccagtaaagccagctgatttggatgatacaccgtttacgctagtt
gaagataaagaaggcttaaaggaattagctataaagttgaagagtgtaactgaatttgct
gtcgatttggagcacaatcaatataggtcatttcagggtttgacctgcttgatgcagatt
tcaacaagaacagaggactttatagtggacactctgaagcttcgtatatatattggcctc
tacttgaaagaatattttaaagatccaaccaagagaaaggtaatgcatggggcagatcga
gatataatgtggctccaacgggatttcaacatttatgtgtgcaatctttttgacacagga
caggcttcgagggtcttacagatggagagaaacagcctagagcacctattgcatcacttt
tgcggagtgacagcaaagaaggaatatcaaactgcagattggaggccgagaccacttcct
gatgaaatgatcaagtatgctagagaagatacacactatctgctctacatatatgacctg
atgagacagagactacagagggaatcaacatttgaaaatgatctgcttctagaggttcaa
aagcgcagtaatgaaatttgcttacagttttatgaaaaggagctgctgacagatacatcc
tatctccatatatacaggttgcaggaacatgaactgaatgcaaaacagctggctgttgtt
gctgctctacataagtggagagatcatatagctcgtcaagaagatgagagcactggttat
gtattgccaaataaggctttaattgagatagcaaagcagatgcctacagacactggacat
ttaaaaagaatagtgaaatcaaaatatccatttgttgagagcagtcttgacctaatcatg
tacatcgtctggaatgcacctgaatattcttatgcctatgaagcaatagctgagcaacta
aagaaggaacggctggaacagttggcgttggaaagtgttcaggctagtgatgcaatgact
gctttggatgctgaggataagagtaattttgatccagccgatcagtcttctgtagctcct
ttatcaactgcaaatgtcaatgttgcttctggcagtagggctagttttatgagtgaagca
tctttgattggtagcctgcacctggatgacaagactcgggccatatcatcatctgaaact
cggacctcccagaccttatcaggcctcatcagaccaatgaataaggaagtcctgagtaat
aatagataccagcaggcttttcaagaactgaagaggcccactttaggagctttaatggga
aattcagcatctggaagacggtcagagatttttggagggttttcaaacgagcagggtggg
agcaatgtggagaagttacttcctttccagcagctctctggtggggtgaaacgttcagct
actatcgtgcccacagaatcatcatatccaaatcaagggatgcacagtgataatttttgg
attcaatcaactcagatgaacgaagtgatgcagctaggcaacacaacttactacccacag
cttccaggatataacaccgaagttgtcgggagtcattataaacctgaaggcacgcagatg
cccagctacctgtctggttttgatcccggctttcaatcaataaaccagagaagtacagga
acgggacagcctcctggtagaaataaggaaggaagtttccagagcccaatgagacgacaa
tctttcccaccttccggtaacagatatgatagtacataccagtag

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