KEGG   Phragmites australis (common reed): 133916905
Entry
133916905         CDS       T10575                                 
Name
(RefSeq) ras-related protein RABF1-like
  KO
K07887  Ras-related protein Rab-5A
Organism
paua  Phragmites australis (common reed)
Pathway
paua04144  Endocytosis
paua04145  Phagosome
paua04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:paua00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    133916905
   04145 Phagosome
    133916905
   04148 Efferocytosis
    133916905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:paua04131]
    133916905
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:paua04147]
    133916905
   04031 GTP-binding proteins [BR:paua04031]
    133916905
Membrane trafficking [BR:paua04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    133916905
 Endosome - Lysosome transport
    133916905
Exosome [BR:paua04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133916905
  Exosomal proteins of other body fluids (saliva and urine)
   133916905
  Exosomal proteins of colorectal cancer cells
   133916905
  Exosomal proteins of bladder cancer cells
   133916905
GTP-binding proteins [BR:paua04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    133916905
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU ATPase MMR_HSR1 AAA_7 AAA_22 MMR_HSR1_Xtn
Other DBs
NCBI-GeneID: 133916905
NCBI-ProteinID: XP_062216777
LinkDB
Position
4:47027865..47032818
AA seq 200 aa
MGCSSSVPARSTGGLNNINNDSSSATDSKDLRAKLVLLGDSGVGKSCIVLRYVRGQFDPT
SKVTVGASFLSQTLALEDSTIVKFEIWDTAGQERYAALAPLYYRGAAAAIVVYDITSPES
FSKAQYWVKELQKHGSPGIVMVLVGNKADLHENRSVSYQDAQEYAEKNNMFFIETSAKTA
DNINQLFEEIAKRLPRPTAS
NT seq 603 nt   +upstreamnt  +downstreamnt
atgggttgctcctcctccgtgccagcgagaagtacaggaggactgaacaatatcaacaac
gatagctcttctgccactgattccaaggacttgcgtgctaagttggtattgctgggagac
tcgggtgttgggaaaagctgcattgttcttcgctatgttcgtggtcagtttgatcctact
tccaaggtaactgttggtgcatcttttttatcgcaaacattggcactggaagactcaaca
atagtgaagtttgaaatttgggatactgctgggcaggagaggtatgctgccttggcacca
ctttactacagaggagctgctgctgcaattgttgtctatgacataaccagtccagaatca
tttagcaaagcacaatactgggtaaaggaacttcagaaacatggtagtcctggaattgta
atggttttggttggtaataaggctgatctacatgaaaatcgaagtgtatcttaccaggat
gcacaagagtacgcagagaagaacaatatgtttttcattgagacgtcagcaaagacagct
gataatataaaccaactgtttgaggaaattgcaaagaggttgcccaggccaacggcgtct
tga

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