Phragmites australis (common reed): 133916906
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Entry
133916906 CDS
T10575
Name
(RefSeq) cell division control protein 48 homolog E
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
paua Phragmites australis (common reed)
Pathway
paua04141
Protein processing in endoplasmic reticulum
Brite
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
133916906
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
133916906
Membrane trafficking [BR:
paua04131
]
SNARE
SNARE associated proteins
Others
133916906
Autophagy
Aggrephagy
Other aggrephagy associated proteins
133916906
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133916906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133916906
NCBI-ProteinID:
XP_062216778
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Position
4:47033669..47038363
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AA seq
809 aa
AA seq
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MASQGEPSSSDPKEKKDYSTAILERKKSPNRLVVDEATNDDNSVVSLHPDTMERLPLFRG
DTVLLKGKKRKDTICIVLADDTCEEPKIRMNKVVRKNLRVRLGDVISVHQCPDVKYGKRV
HILPIDDTVEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPAEYC
IVAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEK
NAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEHIAKDTHGYVGADLAALC
TEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALGISNPSALRETVVEVPNVS
WDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGG
AADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRFS
IFKACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRSCKYAIRENIEKDIERERRRKD
SPEAMEEDEADDIAEIKASHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP
DQLAAASTGAAADPFASAAAAADDDDLYN
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccagggcgagccgtcgtcctccgatccgaaggagaagaaggactactcgacg
gcgatcctggagaggaagaagtcgccgaaccggctggtggtcgacgaggccaccaatgac
gacaactccgtcgtctcgctccacccggacaccatggagaggctcccgctcttccgcggc
gacactgtcctgcttaagggtaagaagagaaaagacacaatctgcattgtgcttgctgat
gacacgtgtgaggagccaaagatccggatgaacaaggtcgtcaggaagaacttgagggtg
cgacttggtgatgtgatttctgtccatcaatgcccagatgtcaaatacgggaagcgtgtg
cacatacttccaattgatgacacagttgaaggcattactggcaacttgtttgatgccttc
ttgaaaccgtacttccttgaagcctatcgtcctttgagaaaaggagaccttttcctcgtc
aggggtggtatgagaagtgttgaattcaaagttatagagaccgaccctgcagagtattgt
atcgttgcaccagatacggagatattctgtgagggagagcctgttaagagggaggatgag
gaaaggcttgatgaggttggctatgatgatgttggaggggttagaaagcagatggcccaa
atcagagagttggttgaacttccactgcgtcatccccagcttttcaagtctattggtgtg
aagccaccaaagggcatacttctgtatggaccacctggctctggcaagacccttatcgct
agagctgtagccaatgaaacaggtgcattcttctttctgatcaatggaccagaaattatg
tcaaagctagcaggagaaagtgagagcaatctcagaaaggcatttgaagaggctgagaag
aatgcaccatccatcattttcattgatgagttagattccatagcacctaagagagagaag
acccatggagaagttgaaaggcgtattgtttcacagctcttgactcttatggatggcctc
aagtctcgtgctcatgttattgttatgggtgctacaaaccgtccaaacagtattgatcct
gctctcagaagatttggtaggtttgaccgtgagattgacattggagttcctgatgaagtt
gggcgccttgaggttctccggattcacactaaaaacatgaagctggctgaagatgttgac
ttggagcacattgcgaaggatacccatggttacgtcggtgcggatcttgctgccctttgt
actgaggctgctctccagtgcattcgtgagaagatggatattatagatcttgaggatgag
accatagatgccgagatactgaactccatggctgtcacaaatgaccatttcaagactgca
cttgggataagcaacccgtctgctctccgtgaaactgttgttgaagtacctaatgtctct
tgggatgatattggtggtctggagaatgtcaagagggagctccaggagactgtccaatat
ccggtggagcatccagagaagttcgaaaagtttggcatgtctccttcaaaaggtgttctg
ttttatggccctcctggctgtggtaagactttgttggccaaggcaattgctaatgaatgc
caggcgaacttcattagtgtgaagggacctgagctgcttaccatgtggtttggtgagagt
gaggccaatgtacgcgagatttttgacaaggctaggcaatctgctccatgcgtcctcttc
ttcgatgagcttgactccattgctactcagagaggaagcagcgttggtgatgccggaggt
gcggctgatagggtgttgaaccagctgctgactgagatggatggcatgaatgccaagaag
actgttttcattatcggtgccactaacaggccagacatcattgaccccgccttgcttagg
ccaggacgacttgatcagctgatctacattcctctgcctgacgagcaatcccggttctca
atcttcaaagcctgcctcaggaagtctcctgttgctaaggatgttgacttgaatgctctt
gccaaatacacccaggggtttagcggtgcagatatcacagaaatctgccaacgctcgtgc
aagtatgccatcagggagaacatcgaaaaggacattgaaagggagaggcggaggaaggac
agccctgaggccatggaggaagatgaggcggacgacattgctgagatcaaggcttctcac
ttcgaggagtcgatgaagtatgcgcgccggagcgtgagtgacgccgacatccgcaagtac
caggccttcgcccagactctgcagcaatctcgtgggttcggcagcgagttccggttccct
gaccagctggcggcggcaagcactggcgctgcggccgaccccttcgcgtccgctgcggct
gcagctgacgatgatgacttatataattaa
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