Phragmites australis (common reed): 133916984
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Entry
133916984 CDS
T10575
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like isoform X1
KO
K04523
ubiquilin
Organism
paua Phragmites australis (common reed)
Pathway
paua04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133916984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133916984
03051 Proteasome [BR:
paua03051
]
133916984
Membrane trafficking [BR:
paua04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
133916984
Proteasome [BR:
paua03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
133916984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Dsc3_N
Rad60-SLD_2
HEAT_HEATR1
TSC22
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
133916984
NCBI-ProteinID:
XP_062216877
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Position
4:48094353..48100081
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AA seq
534 aa
AA seq
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MSGGDGDAGGEPAAAGAEQATLHIRCTSGSKFAVRADLGATVEAFKAIVAESCDVPAPQQ
RLIYKGRILKDEQTLASYGVETDHTIHMVRGAAPPPASTAPAASHETSATTPASSPTAGL
GGLLQGLGATGSANGGGLGLFGSGLPELDQMQQQLAENPNLMREMMNMPLMQNIMNSPDL
IRNIIMNNPQMRELIDRNPDLAHVLNDPSILRQTVETARNPELMREMMRNTDRAMSNIES
SPEGFNMLRRMYETVQEPFLNATTMGGEGDRNPNPFAALLGNQGSNQARFPAANAPTTAS
DSTTGSPAPNTNPLPNPWGSTAGSAQGTARPSPASNARSATTGGLGGLGSADLGSMLGGG
SDASFLSQVLQNPTMMQMMQNIMSNPQSMNQLLNINPNVRNMMESNTQLREMFQNPEFLR
QLTSPETLQQLISFQQSLVSQLGQQVGQERTQPGTGAGNVNLNTLMNMFSGLGAGGGLGV
SNTPNVLPEELYATQLAQLQEMGFFDTQENLRALIATAGNVHAAVERLLGNLGQ
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaggggacggcgatgccggtggcgaacccgcggccgcgggggccgagcaggcg
acgctgcacatccggtgtaccagcggctccaagttcgccgtgcgggccgacctgggcgcc
accgtcgaggcgttcaaggcgatcgtcgccgagagctgcgacgtgccagcgccgcagcag
cggctgatctacaagggccggatcttgaaggacgagcaaaccctagccagctacggtgtg
gagacagaccataccattcacatggtgcgtggtgctgcgccaccaccagcatcaactgca
cctgcagccagccatgaaacttcagctactactcctgccagttccccaacagctggtttg
ggaggcttgttgcaaggtctgggtgctacagggtctgctaatggtggagggttgggttta
tttggctctggcctcccagaactagaccagatgcaacaacagttagccgagaatcccaac
ttgatgagggaaatgatgaatatgccactcatgcagaatataatgaatagtcctgattta
atacgcaatataataatgaacaatccacaaatgcgtgaactcattgaccgtaacccagat
cttgcccatgtcctgaatgatccgagtatcctccgccagactgttgaaacagctaggaat
cctgaacttatgagggagatgatgcggaacacagacagagccatgagcaacattgaatct
tctccagaagggttcaacatgctccgccgcatgtatgaaactgttcaagagccttttctg
aatgcaacaacaatgggtggtgagggtgatagaaatccaaacccatttgcagctcttcta
ggaaatcaggggtctaaccaagcaagatttccagctgcaaatgccccaactacagcttca
gattccacaacagggtctccagctccaaatactaacccacttccaaatccctggggctca
actgctggctctgcccaaggaacagcaaggccctctcctgctagcaacgcaaggagtgct
acgactggtggcctaggagggttgggttctgcagatttgggaagtatgcttggtggtggc
tctgatgcttccttcttgagtcaggttttgcaaaacccaactatgatgcagatgatgcag
aacatcatgtctaatcctcaatccatgaatcagttgcttaatatcaacccaaatgtacgt
aatatgatggaatcgaatactcaactgagagaaatgtttcagaatccggaatttcttcgc
cagttgacatctcctgaaacgctgcagcaattaatttcattccagcagtctttggtgtca
caacttggtcaacaagttggacaggagcgtacacaaccaggcactggtgcaggcaatgtc
aacctcaacaccttgatgaacatgttcagtgggctcggtgctggcggtggcctaggtgtt
tcgaacacccctaatgtgctgccggaagaactctatgcaacacagctagctcagctccaa
gaaatgggcttctttgacacacaggagaacctccgagctttgatcgccaccgctggaaat
gttcatgctgcagtggagcgacttcttgggaatttgggccaatag
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