KEGG   Phragmites australis (common reed): 133917163
Entry
133917163         CDS       T10575                                 
Name
(RefSeq) DNA repair endonuclease UVH1 isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
paua  Phragmites australis (common reed)
Pathway
paua03420  Nucleotide excision repair
paua03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    133917163
   03460 Fanconi anemia pathway
    133917163
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:paua03032]
    133917163
   03400 DNA repair and recombination proteins [BR:paua03400]
    133917163
DNA replication proteins [BR:paua03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    133917163
DNA repair and recombination proteins [BR:paua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     133917163
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 133917163
NCBI-ProteinID: XP_062217151
LinkDB
Position
4:complement(50128979..50135201)
AA seq 1103 aa
MARTASRRRRSSLDGKRPGGGSAAILRLLGPGRGGGMDRWGELLSACAGRAGTGCGVGWF
AGPIRCKAHENKKRMEDQAGFQIEIRSYPLIIAVRGEGIAVKSGPAAMLAFEEQVVADLV
EDPNGGLVVLSSGLPLASLAAALLLHLHHQPPVGAAGGGCILLLSAPDPLKTRIRRRLHL
HDLGLQLHEVAPDLPAQQRASLYASGAALFLSPRALAADLLTSRLLPSQVRALLLLSAHR
SSDTSSDAFVARLLRHRHLLPVYAFSDRPHAMVAGFAKAERAMKSLYVRRLHLWPRFHVL
AAADLEHAPPDVVDVRVPMTPPMRGIQAAVLAAMDACLKELRRTNKVDVEDLTVDKGLFK
SFDEIVRRQLDPIWHTLGKKTKQLVADLRTLRKLLDYLVRYDAVTYLKYLDTLRVSEGVR
SVWILADSSHKIFELAKRRVYQVVRADSTKVSTDNKGTPTKKRKLTHSSTKKGKEAENDD
STAAKDDTWKVNADVGIVLEEVIEEAPKWKVLRELLQEIAEEQTKGNGENAQDGDTNDES
GIVLVTCKDERSCLQLQEYISKGSHQVMLEEWEKYLLGKAELHGLHKKNKKKSQQPKGFG
LLDGDIQMGPSKSAGPISIGKLEIDALLAAASEIRNLTKEADVKDDSNVSCSKRRLVKGK
GKGKPKKTMAKRQASNRKNKSNGGNDTDQGTDLDAESQSGKMDEQAEIDASKVSADDVSV
SASTAGDGCKYSSAFEDLANGKPLPPVQFYALDSEQHVLDVWKPSVIIVYHPDITFVREI
EVYKAENPSRKLKVYFLFYEDSTEVQKFECSIRRENEAFESLIRQKSLMMIPVDQDGSCI
GPTLTSEPEPLLSQNSITRKAGGRKVPENEMQVIVDMREFMSSLPNVLHQKGIRIVPVTL
EVGDYVLSPLICVERKSIADLFQSFASGRLYNQVETMVRYYKIPVLLIEFSQDKSFSFQS
ASEIGDDVSPTNIISKLSLLVLHFPRLRIVWSRSLYATAEIFMSLKRNQDEPDENKAMRV
GVPSEDGIVENDVRAENYNTSAIEFLRRLPGVTDSNYRAIMDGCSSLAELALLPVERLAE
LMGSQKGARTLKEFLDAKCPTML
NT seq 3312 nt   +upstreamnt  +downstreamnt
atggcgaggacggcgagcaggcggaggaggtcgtccctggacgggaagaggccgggaggg
ggctcggcggcgatcctccgcctgctcgggcccggccgcggcggcggcatggatagatgg
ggagagctcctctctgcctgtgctggacgggccgggactggctgcggagttggttggttt
gctgggcccatacgatgtaaggcccacgaaaacaagaagagaatggaggaccaagcagga
tttcagattgaaattcgttcgtacccactcatcatcgccgtccgtggagaaggtatcgca
gtgaagtcggggccggcggcgatgcttgcgttcgaggagcaggtggtggcggacctggtg
gaggaccccaacggcggtctggtggtgctctcctcgggcctcccgctcgcctccctcgcc
gccgccctcctcctccacctccaccaccagccccccgtgggggcggcggggggaggatgc
atcctcctcctctccgcacccgaccccctcaagacccggatccgccgccgcctccatctc
cacgacctcggtctccagctccacgaagtggcccccgacctccccgcccagcagcgcgcc
tccctctacgcctccggcgccgcgctcttcctctcccctcgcgccctcgccgctgacctc
ctcacctcccgcctcctcccctcacaggtccgggccctcctcctcctctccgcccaccgc
tcctccgacacctcctccgatgccttcgtcgcccgcctcctccgccaccgccacctcctc
cccgtctacgccttctccgaccgcccccacgccatggtcgctggctttgccaaggccgag
cgtgccatgaagagcctctacgtccgccgcctccacctctggccccgcttccatgtcctc
gccgcggccgacctcgagcacgccccgcccgacgtcgtcgacgtacgcgtccccatgacg
ccgcccatgaggggcatccaggccgccgtcctcgccgcaatggacgcctgcctcaaggag
ctcaggcgcaccaacaaggtggatgtcgaggacctcactgtcgacaagggcctcttcaag
tcctttgacgagatcgttaggaggcagctcgaccccatttggcacacgctcggcaagaag
acaaagcagctcgtcgccgacctcaggacactacgcaagctgctagattacctcgtcagg
tatgatgctgtgacatacttgaagtacctggacacgctgagagtatccgaaggtgttcga
tcagtttggatacttgctgactcaagccacaagatatttgagctcgcaaaaaggcgtgtt
taccaggttgtgagagcagacagtacaaaggttagcacagataacaagggcacaccaaca
aagaagaggaaattgacacacagtagtaccaagaaaggaaaagaagccgaaaatgatgat
tccactgctgccaaggatgacacttggaaggttaatgctgatgtgggtatcgtactggag
gaggttattgaggaggcaccaaaatggaaagtgttaagggaattgttgcaagagatagca
gaagaacagacaaagggaaatggtgagaatgcacaagatggagacacaaatgatgaaagt
ggcatagttttagtaacatgcaaagatgagcgctcatgcttgcagctgcaagaatacata
tcaaaaggctcccatcaggttatgttagaagaatgggagaagtatttgcttgggaaagct
gagctgcatggattacataagaagaacaagaaaaaatctcagcaaccaaaagggtttggt
ctcctggacggggatattcaaatggggcctagcaaaagtgcaggtcctattagcattggc
aagcttgaaattgatgccttacttgcagctgcctctgaaataagaaatttaactaaggaa
gcagatgtcaaggacgattcaaatgtcagctgcagtaagaggcggttggtaaagggaaaa
ggaaaggggaagccaaagaaaaccatggcaaagagacaagccagtaatagaaaaaataaa
agtaacggaggaaatgatactgaccaaggtactgatctggatgctgaaagtcaatcaggc
aaaatggatgaacaggccgagattgatgcttctaaggtgtctgcagatgatgtttcagtg
tcagcctccactgcaggcgatggatgcaagtattcatctgcttttgaagacttggcaaat
ggcaaaccactacctcctgtgcaattttatgccctagacagtgaacagcatgtacttgat
gtatggaagccctctgtaattattgtttatcatccagatataacctttgttagagaaatt
gaagtatacaaggcagaaaacccatcaaggaagttaaaagtttacttcctattttatgaa
gattccaccgaggtgcaaaaatttgagtgcagcattcgacgggaaaatgaagcatttgaa
tctttgatcagacagaagtccctaatgatgatacctgttgatcaggatggcagttgcatt
ggaccgactctcacaagtgaaccagaacctcttttatctcagaactcaattacaagaaag
gcaggtggtagaaaggtaccagagaatgagatgcaggtcattgtagacatgagggagttc
atgagcagccttccgaatgtattacaccagaaaggtattcgaatagtaccggtcaccctt
gaagttggtgactatgttctttctcctttgatctgtgttgaacgtaaaagtatcgcggac
ttgttccaaagctttgcttctggccgtctgtacaatcaggttgagaccatggtacggtat
tacaagatcccagttcttctgatagagttctcacaagataagagcttttcctttcagtca
gcaagtgagattggggatgatgtctctccgacaaacataatctcaaagctttcattgcta
gtcctgcattttcctcggcttcgcatagtctggtctcgcagcttgtatgctacggcggag
atatttatgtcactcaaaagaaaccaggatgaacctgatgagaacaaggcaatgagagtc
ggtgtgccctctgaggatggaattgtggagaatgatgtgagggctgagaattacaacaca
tcagcgattgagttcttaagaaggcttcctggggtgacagattcgaactacagagcaata
atggatggatgcagtagcttggcggagctggccctgcttccggtagaaaggttggcggag
ctaatgggcagtcagaaaggagcacgcacgctgaaggagtttctcgacgccaagtgtcca
actatgctgtga

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