KEGG   Phragmites australis (common reed): 133917392
Entry
133917392         CDS       T10575                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
paua  Phragmites australis (common reed)
Pathway
paua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133917392
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:paua03041]
    133917392
Spliceosome [BR:paua03041]
 Complex A
  U2 snRNP components
   U2 related factors
    133917392
 Complex B
    133917392
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4 DNA_alkylation
Other DBs
NCBI-GeneID: 133917392
NCBI-ProteinID: XP_062217279
LinkDB
Position
1:37296965..37300539
AA seq 279 aa
MAEHLASIYGTEKDRVNCPFYFKIGACRHGDRCSRIHNKPTISPTLVLVNMYQRPDMITP
GVDAQGQPIDPRKMQEHFEDFYEDIFEELSKFGEIENLNICDNLADHMIGNVYAQFREED
QAAAAHTALQGRFYSGRPIVVDFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQIGKDL
RKKLFGRSRRPHRGRSRSPSPHRRMEGRDRDNYRGRDDYRGGGGGRRGGSSRHERYDDGG
RRRHGGSPPRRARSPARENSEERRAKIEQWNREREEKQG
NT seq 840 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcttcaatatatggtacggagaaagatagagtcaactgcccattt
tacttcaagattggggcttgccgtcatggggatcgttgttcacgcatccataacaagcca
accatatcgccaactcttgtgcttgtgaacatgtatcagcgccctgacatgatcacccct
ggggttgatgctcaaggccagccaatagatccccgtaagatgcaggagcattttgaagat
ttttatgaggatatctttgaggaactgagcaagtttggtgagattgagaatctcaatatc
tgcgataaccttgctgatcacatgataggcaatgtttatgcccagttcagggaggaagat
caggcagctgcagctcatacagcccttcagggccgcttttactccggtcgcccaattgtt
gttgacttctcccctgtgactgatttccgtgaagcaacctgcaggcaatatgaggagaat
agctgcaatcggggtggatattgcaatttcatgcatgtgaagcagattggtaaggatctg
aggaaaaagctctttgggcgttccaggaggccacacaggggaaggagccgcagcccaagc
ccacatcgtaggatggagggtcgtgaccgtgacaactatcgcggccgtgatgattaccgt
ggtggcggcggtgggcgtaggggtggaagcagcaggcatgaaaggtatgatgatggagga
aggcgcaggcatggtggcagccctcccagacgtgcaagaagccctgccagggagaacagt
gaggagcgcagggctaagatcgagcagtggaaccgtgaaagggaggaaaagcaagggtga

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