Phragmites australis (common reed): 133917544
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Entry
133917544 CDS
T10575
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
paua Phragmites australis (common reed)
Pathway
paua02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133917544
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paua02000
]
133917544
04147 Exosome [BR:
paua04147
]
133917544
04090 CD molecules [BR:
paua04090
]
133917544
Enzymes [BR:
paua01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133917544
Transporters [BR:
paua02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133917544
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133917544
CD molecules [BR:
paua04090
]
Proteins
133917544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_29
AAA_22
RsgA_GTPase
Zeta_toxin
AAA_21
AAA_15
DUF87
AAA_30
APS_kinase
AAA_28
SRP54
Motif
Other DBs
NCBI-GeneID:
133917544
NCBI-ProteinID:
XP_062217408
LinkDB
All DBs
Position
5:27627438..27638810
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AA seq
1225 aa
AA seq
DB search
MSVFMHADAADVALMVLGLVGAIGDGMSTPLRLLIACRIANDLGSGPDLLQEFTSRINAN
VTNIVFLACASWVMAFLEGYCWARTAERQASRMRARYLRAVLRQDVEYFDLKAGSSSEVV
TSVSNDSLVVQDALGEKVPNFVMNVAMFAGSYAVGFTLLWRLTLVALPSVLLLVIPGFTY
SRVITGLARRIREQYARPGAIAEQAVSSVRTAYSFVAERSTMARFSAALEKSARLGIKQG
LTKGIALGSNGIVFAIYAFNIWYGSRLVMYHGYPGGTVFMVSSLIIIGGVSLGSALSNVK
YFSEATAAAERILEMIQRVPKIDSESDAGDELTSVAGAVEFKNVEFCYPSRKESPVFACF
SLRVPAGRTVALVGGSGSGKSTVIALLERFYDPSAGEVVLDGVDIRRLRLKWLRAQMGLV
GQEPAMFATSVRENILFGKENATAEEVIAAAKAANAHNFISQLPQGYDTQVGERGVQMSG
GQKQRIAIARAILKSPKILLLDEATSALDSASERVVQEALDVASMGRTAIVVAHRLSTIR
NADTIAVMQSGAVQEQGSHSELIARNGLYSSLVHLQQTCRGPIEGNEVIGETCRASPTVG
QCSSNTTSKMCSSVSRSSPARSMGDAGDGDGAVEPKPPAVPSFRRLLLLNAPEWKHALVG
SFSAFLSGAIQPVYAYGMGSMFSVYYLTDHEEIKDKTRMYALVFLALVVLSFLLSIGQHY
SFGAMGEYLTKRVRERMLEKILTFEIEWFDHGDNSSGAICSRLAKDANIVRSLVGDRVAL
VIQTVSVVFIACTMGIAIAWRLALVTIAMQPLIVACFYARRVLLKSMSMKSIQAQAETSK
LAADAVSNLRTITAFSSQDRILRLFGQAQDGPRKESIRQSWFAGFGLGTSVSVMVFSWAL
SFWYGGKLMAERRITAEAVFQTTMILVITGRVIADACSMTADLAKGADAVASVFAILDRE
TKIDPDSPEGYKPEKLTGEVEIIGVDFAYPSRPDVIIFKGFSLSIMPGKSTALVGHSGSG
KSTIIGLIERFYDPLRGVVSIDGRDMKTYNLRALRRQIGLVSQEPTLFSGTIRENIMYGL
ETASAAEVEDAARSANAHDFIGGLKDGYDTWCGDRGVQLSGGQKQRVAIARAILKNPAIL
LLDEATSALDSQSEKAVQEALDRVMVGRTSVVVAHRLSTIQSCDMIAVLERGAVVEKGTH
ASLMAKGPSGTYFGLVSLQQGGNQH
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgttcatgcacgcggacgcggcggacgtggcgctgatggtgctgggcctggtg
ggcgccataggcgacggcatgtcgacgcccctgcggctcctcatcgcctgccgcatcgcc
aacgacctcggcagtggccccgacctcctccaggagttcacctccaggatcaatgcgaac
gtgaccaacattgtcttcttggcgtgcgcatcctgggtcatggcgttcctagagggttat
tgctgggcacggacggcggagcggcaggcgtcacggatgcgagcgcggtacctgcgggcg
gtgctccggcaggacgtggagtacttcgacctcaaggcgggctcgtcgtcggaggtggtc
accagcgtgtccaacgacagcctcgtcgtgcaggacgcgctgggcgagaaggtgcccaac
ttcgtgatgaatgtcgccatgttcgccggcagctacgccgttgggttcacgcttctgtgg
cggctcacgcttgtggcgctgccgtccgtactgctgctcgtcattcccgggttcacgtat
agccgcgtcatcactggcctcgcgcgacggatcagggagcagtacgcgcgcccaggcgcc
atcgccgagcaggccgtgtcgtcggtgcgcaccgcgtactcgttcgtggcggagaggagc
accatggcgcggttctccgccgcgctcgagaagtcggcacggctcgggatcaagcagggg
ctcaccaagggcatcgccctcggcagcaacggcatcgtcttcgccatctatgccttcaac
atctggtacggcagccgcctcgtcatgtaccacggctacccgggcggcaccgtcttcatg
gtctcctccctcattatcattggcggcgtgtcgctgggatcggcgctgtcgaacgtcaag
tacttctcggaggccaccgcggcggcggagaggatccttgaaatgatacaacgggtgccc
aagatcgattcggagagcgacgccggcgacgagctgaccagcgtcgccggcgcggtggag
ttcaagaacgtcgagttctgctacccatcgcgaaaggagagccctgttttcgcttgcttc
agcctgcgcgtgccggcggggcgaacggtggcgctggttggtggcagcgggtcggggaag
tcgacggtgatcgcgctgctggagcggttctacgacccgtcggccggggaggtggtgcta
gacggcgtggacatccggcggctgcgtctcaaatggctgcgcgcgcagatggggctcgtc
ggccaggagcccgcgatgtttgcgacgtcggtgcgggagaacatactgttcggcaaggag
aatgcgacggcggaggaggtcatcgccgcagcaaaagcggccaacgcccacaacttcata
tcgcagctgccgcagggctacgacacgcaggtgggtgagcgtggtgtacaaatgtctgga
gggcagaagcaaaggattgctattgcgagagcaatcctgaagtcacccaagatcctcctc
ctcgacgaagccacgagcgcactggactcggcgtctgagcgcgtcgtgcaggaggcgctt
gacgtggcctccatgggccggactgcgattgtcgtcgcacatcgcctctccactatccgg
aatgctgatactatagccgtcatgcagtctggtgcagtccaggagcagggctcccacagc
gagctcattgccaggaatggcctgtactcatctctcgtccatcttcagcagacctgcaga
ggtccaatcgagggcaatgaggttattggcgaaacctgtcgtgcatctcctactgtgggg
caatgcagcagcaacacgacgagcaagatgtgctcttcggttagcaggtcaagcccggca
cggtccatgggtgatgcaggagatggtgacggcgccgtggagccgaagcctcctgctgtg
ccatccttcagaaggttgcttctcctgaatgcgccagagtggaagcatgcactggtgggg
agcttcagcgcgttcctgtctggggccatccagcctgtttatgcatatggcatggggagc
atgttctccgtctactacttgacagatcatgaggagatcaaggacaagacaaggatgtac
gcgctcgtctttctcgctctggtggtgctctcattcttgctcagcatcgggcagcattat
agcttcggtgccatgggggaatacctgaccaagagggtcagggaacgaatgcttgaaaaa
atcctcacttttgagatcgagtggttcgaccatggcgacaactccagtggcgccatatgc
tctcggcttgccaaggacgccaacatcgtgcggtcactcgttggtgaccgagtggctctg
gtgatccagacggtttctgtggtgttcattgcttgcacaatgggtatcgccattgcttgg
cgcttggcccttgttacgatagcaatgcagccgcttatcgttgcttgcttctacgctcgc
cgtgtcttactaaagagcatgtccatgaaatcaatacaggcgcaggccgagactagcaag
ctagctgccgacgccgtctccaacctccgcaccatcaccgccttctcatcccaggaccgc
atcctacgcctcttcggccaagcgcaggacgggccacgcaaggaaagcatccggcagtca
tggttcgcaggcttcggcctcggcacctctgtgagcgttatggtattctcatgggccctc
agcttttggtacggtggcaagctcatggctgagcgacgcatcaccgccgaggcagtcttc
caaaccaccatgatcctagttatcacagggcgtgtcattgcagatgcgtgtagcatgaca
gcagaccttgccaagggtgccgatgcggtcgcttcggtgttcgctattcttgaccgcgag
acgaagatcgaccctgacagtcccgaggggtacaaacccgagaagctcacaggggaggtg
gagattataggagtcgatttcgcgtatccgtcgaggccagatgtgatcatcttcaaagga
ttctccttgagcataatgccaggcaagtcaacagcgctagttgggcacagtggctccggc
aagtcaaccatcatcgggcttatagagcggttctatgacccgctcaggggagtggtgagt
atcgatggtagagacatgaaaacatataatctgcgagccctacgacgacagatcgggctg
gtcagccaggagccaacgctgttctccggcaccatcagagagaacatcatgtacggcttg
gagacggcgagcgcggcagaggtcgaggacgcggcgaggtccgccaacgcgcacgacttc
atcggcggcctcaaggacgggtacgacacatggtgcggcgaccggggcgttcagctgtcc
ggagggcagaagcagcgcgtcgcgatcgcccgcgccatcctcaagaacccagccatcctg
ctgctggacgaagctacaagcgcgctggacagccagtcggagaaggcggtgcaggaggcg
ctcgaccgggtgatggttggccggacgagcgtggtggtggcgcacaggctcagcaccatc
cagagctgtgacatgatcgctgtgcttgagagaggagccgtcgtggagaagggcacgcat
gcgtccctcatggccaagggtccctctgggacgtactttgggctggtcagtttgcagcag
ggaggcaaccagcattga
DBGET
integrated database retrieval system
