Phragmites australis (common reed): 133918185
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Entry
133918185 CDS
T10575
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133918185
Membrane trafficking [BR:
paua04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
133918185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
133918185
NCBI-ProteinID:
XP_062217912
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All DBs
Position
5:460932..468201
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AA seq
1533 aa
AA seq
DB search
MASSSFAPDDQTDANFFDKLVVDDDDDDNHLSSAPVPTNEDAALARALSSISLADHGPDP
PVPEAPAPPPATDAAPPEGGSPGSGKGGGVHTAVKQVQWASFGGGADDGVDPFADLSGGA
GDDGFFGTVAGNQTQETSVGVSDHGFFGGNQSLATEVTDRNFFGGSSNQNTGGGLLERSS
SGAVDSTDPKYLETMYPGWKYDEATQQWYQVDSFYATGNAAQVDSSSQNVQQQQQQQQLD
TSYLQNSAHAALETIAEEGTTTGGASSWGQGSDSEYPPNVLFYAEYPGWYFDTNTQQWHS
LESYQQAAMQAGTASAVQNGANHGVVAASGGMDYNVKQTEDLAVHNQVAQHNSFTNSYAH
QSQWKADAFGNTMRSESIKDGSLTGSFYGFDQHANAETISSSTSHQVGFSTVETATDHYG
GHKGLESLSLQSGYNSTDRLQSSYKAFEPSTGYQAGYKGFQPATGHQTSHTVLEQSTGNQ
GGHKAFEPSMGNQNHYKPFEPSTGHQSGYKGFVPSTGHQAGYKGSEASTVQQASYKGFET
STGHNTSFKGFEPSSAQQAGFMGSQPSSGHQSNYKGFETSANQGYGDVNGVVNTQSFVPM
ESMYHGQKQANANPQGHLSNSYLGTENSMNFNQQQFLGANASQLQFGPPHEGRSSAGRPP
HALVAFGFGGKLIVMKETSSMTTNFNSGSQENSSATVSVLNLSEVVDKVDPSSVTNSSAL
SYFHALCRQPVPGPLVGGNAASKDVNKWLDEMIAWYESSASDFQKGDPRKLLISLLKILC
QHYGKLRSPFGSDPSQEETDGPEMAVTKLFSSCKRSSVHMGGYGSIVHCMKNIPSESQMQ
AIAQEVQNLLVSGRRKEALQCAQGGQLWGPAIILALQLGDKFYVDTVKKMARSHFVSGSP
LRTLCLLIAGQPADVFNVEDNINSDYGTVGASHQPMEPGPNGMLDDWEENLAIITANRTK
GDDLVITHLGDCLWKEKAEVAAAHSCYLVAELNIDSYSESARLCLIGADHLKCPRTFVSP
EAIQRTEVYEYAKVLGNSQYILLPFQPYKLIYAYMLAEVGRISDSLRYCQASMKVLKASG
RAPELEAWKQLFSSLEERIRTHQQGGYGTNLAPAKLVGKIFTSLDKSISRMMGTPSAPLP
PLPQGSIIDRESYSAPAAAKFVNSQSVMAMSSLMPSASMQSMSEIAENSGGTGRKIAHNR
SVSEPDFGRTPKQGAGSDRTQSSASGSGSSRFGWLGSTLQKTMGFVSKSHRQEAKLGDQN
KFYYDEKLKRWVEEGAAIPTEEPPLPPPPTKSSFQNGMPDHKLNGPMSASHAPNGVTEWK
SSSSSEQGLGMPPIPPSQNQFSARGRMGVRSRYVDTFNKGGASGAVPSYNKPAAPSVTPP
VGAKFFVPTAAAAATDQMPLQAAEIHSETVHQDERSASLPAETSYSSPPPSTQFSAPMSS
TIHRHPSMDNISTPYQGSGVSSESNSSSFSRSRAASWSGTYSEQFSAIAGVRSPDDQTMP
LPLMPGKPSHSRSNSNSSVQFNGLTEDLHEVEL
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctccttcgcccccgacgaccagaccgacgccaacttcttcgacaagctc
gtcgtcgacgacgacgacgacgacaaccacctctcttccgcccctgttcccaccaacgag
gacgccgccttggctcgagccctctccagcatcagcctcgccgaccacgggcccgaccca
cccgttccggaggcgccggcaccgcctcccgccacggatgcggcgcctccggagggtgga
tcgccggggtcagggaagggcggcggcgtccacaccgcggttaagcaggtgcagtgggcg
tcctttggaggtggtgccgacgatggggttgatccattcgcggatctctctggaggtgcc
ggcgacgacggcttcttcgggaccgtggccgggaaccagacccaagagacctccgtgggg
gtctcggatcacggcttcttcggtgggaatcagagcttggccactgaagtgacggatcgg
aatttcttcggtgggagctcaaatcagaataccggtggtggtctgctggagcgcagcagc
agtggtgctgtggattccacggatcccaagtatttggagaccatgtaccctgggtggaaa
tacgatgaggcgacacagcaatggtaccaggttgacagtttttatgcaactgggaatgct
gcccaggtggacagtagcagtcagaatgtacagcagcagcagcagcagcagcagcttgat
acttcatacctgcagaattcagcgcatgcagctcttgagacaattgctgaggagggcacg
accacaggcggtgcctcaagttggggacaggggagcgactcggagtacccacccaacgtg
ctgttctatgcagagtacccgggttggtacttcgataccaacacccagcagtggcactcg
cttgagtcgtaccagcaggccgctatgcaggctgggacagctagtgcggttcagaatggt
gcaaaccatggtgttgttgcggcttctggtgggatggattataatgtcaagcaaactgag
gatcttgctgtccacaatcaggtggcccaacataactcgttcacaaacagttacgctcat
cagagccaatggaaagcggatgcatttggtaacactatgcgatctgaaagtattaaagat
ggtagcctgacaggtagtttctatggttttgatcagcatgcaaatgctgagactatcagt
tcctctacaagccatcaggttggttttagcacagttgaaactgctacagatcactatggt
ggacacaagggcttagaatcgttgagtcttcagagtggttataactcaactgaccgtcta
caatccagttacaaggcgtttgaaccttccacaggttatcaggccggttacaaagggttt
caacctgccacgggccaccagaccagtcacactgtgttggaacagtccacgggtaaccag
ggaggtcacaaggcatttgaaccttccatgggtaaccagaatcattacaaaccgtttgaa
ccttccacgggtcaccagagtggttacaaggggtttgtgccttccacaggtcaccaggct
ggttacaagggatccgaagcttccacagttcagcaggccagttataagggatttgaaact
tctacaggccataacaccagtttcaagggatttgaaccttcttcagctcaacaggctggt
ttcatgggatcccaaccttcttcaggtcaccagtctaattacaaaggatttgaaacttcc
gcaaatcagggttatggtgatgtcaatggtgttgtgaatacacaaagctttgtcccaatg
gagagcatgtaccacggccagaaacaagcaaatgcaaatccacaagggcacttgtcaaac
agctatttgggtactgagaactccatgaacttcaatcagcaacaatttcttggtgcaaat
gcttcacagttgcaattcggtccccctcatgaagggaggtcatcggctggacggccaccg
catgcccttgttgcttttgggtttggagggaaacttatagttatgaaagaaaccagctca
atgaccacaaactttaacagtggaagtcaggagaattctagtgccacagtgtcagttctt
aatctatcagaagttgttgataaagttgatccgtcaagcgtcactaatagcagcgcgctt
agttacttccacgctttatgccgtcaacctgttcctggtcctctggtcggtggaaatgct
gcatcgaaggatgtgaacaagtggcttgatgagatgattgcatggtatgaatcttccgcc
agtgatttccagaaaggtgatcctcgcaagttgcttatttcattgctgaagatactgtgt
cagcactatgggaaactacgctcaccttttgggtctgacccatcacaagaggagacagat
ggtccagaaatggcagtaactaagctattttcatcatgtaagagaagcagtgttcatatg
gggggttatggatctatagttcactgcatgaaaaatattccctcggaaagtcagatgcag
gctattgcacaagaggtccaaaaccttctagtttctgggagaagaaaagaggcccttcag
tgtgcccagggaggtcaactttggggacctgcaatcatactggctttacaacttggtgat
aagttttatgtggatacggtgaagaaaatggctcgctcccattttgtatctggatcacct
ctgcgaacgctgtgccttctcattgctggacaacctgcagatgtctttaatgtagaggac
aacatcaacagcgattatggtacagtaggtgcatcccatcaacctatggagcctggtcct
aatggcatgttggatgattgggaggagaatttggctattataactgcaaacaggacaaaa
ggtgatgatctagtaattacccatcttggtgattgcctttggaaagagaaagctgaggtt
gcagctgctcattcatgctatttagttgctgaactaaatattgattcatactctgaaagt
gcaaggttatgcctcattggtgcagaccacttgaaatgccctcgaacatttgtcagccct
gaggccattcagaggacagaagtttatgaatatgcgaaggtgcttggtaattctcagtat
atcctgctaccctttcagccatataagctgatatatgcatacatgcttgcggaagtggga
aggatttctgattctttgaggtattgccaagcgtctatgaaggtgctgaaagcctctggc
cgtgcccctgaactggaggcatggaaacaattattttcttccctggaggagaggatacgc
actcaccagcagggtggatatggcacaaatcttgccccagcaaaactagttggaaagatt
ttcacctcgcttgataaatctatatcccgcatgatgggtacgccatctgcaccacttcca
ccgttgccacagggctccattattgatagagagagctactctgctcctgcagctgcaaaa
tttgtaaatagccaatcggtaatggccatgtcatcgttaatgccatccgcttcgatgcag
tctatgagtgagatagcagagaatagtggtggcactggcaggaaaattgcacacaacagg
agtgtttctgagccggactttggcagaaccccgaaacagggtgctggatcagatcgcaca
cagagtagtgcatcaggatcgggtagttcccgatttggttggttaggctctacgttgcag
aaaacaatgggatttgtgtcgaaatcccaccgccaggaggcaaaattaggggaccagaac
aagttttactatgatgaaaagctgaagcggtgggttgaagaaggtgctgcgattcctacc
gaggagcctcctctccctccacctccaacaaaatcatctttccagaatggtatgccagac
cataagttgaatggccccatgagtgcaagccatgcacccaatggagttacggagtggaaa
tcctcgagttcttcagagcaaggtttggggatgccgccaattccacctagccagaaccag
ttttctgctcgtggacggatgggtgtccggtccagatatgtggacacattcaataagggt
ggtgcatcaggagcagtgccatcatataacaaaccggctgctccatctgtgacaccacca
gttggtgccaagttctttgtgccgactgcagcagctgctgctacagatcagatgcctctc
caagcagcagagatacacagtgagacggtccatcaggatgagcgttcggcctcattgcca
gcagaaacttcatactcttcacccccaccgtcgacacaattttcagcaccaatgtcatca
acaattcatcggcatccgagtatggacaacatctccacaccttaccagggttccggggtg
tcatcagaaagcaacagcagctcattttcaagatcacgggcagcatcatggagtggaaca
tattctgagcagtttagtgctatcgccggtgttagatcacctgatgaccagactatgcct
ttgccactcatgcctggcaaaccttcgcatagtcgctccaacagcaactcatctgtgcag
ttcaacggattgacagaggatctccatgaggttgagctctga
DBGET
integrated database retrieval system
