Phragmites australis (common reed): 133918210
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Entry
133918210 CDS
T10575
Name
(RefSeq) RNA-binding NOB1-like protein
KO
K11883
RNA-binding protein NOB1
Organism
paua Phragmites australis (common reed)
Pathway
paua03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133918210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133918210
03051 Proteasome [BR:
paua03051
]
133918210
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
133918210
Proteasome [BR:
paua03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
133918210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
133918210
NCBI-ProteinID:
XP_062217947
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Position
5:762151..765494
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AA seq
582 aa
AA seq
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MEAWPPLAPAAADDAADHPPPPAVASGAGAWGAAAVAQRKAVVEDSAAQAVSRLVASCAN
SGGVAVAVVDANAAIAGGAALSTTAGRLVTVPEALEEVRDAAARRRLALLPTPVETVEPA
PEFVKKVTKFARETGDLQTLSDVDIKIIALAYMLEAEIHGTSHLREHPPPLRVVNVRKLE
EAPLPGWGSNVSNLKEWEELDQMSEAGGDINSRILPLKDLENQDIPTSETNNICEAQEDS
EHQPSKKDECVAWEDDENNEGWLPAVSRSTHRRYLRRKARRDALKDSEQSLETSSVAPSI
DGNKFLSGNGGNGHDATPADGPSSVPKKMNPSTDGVEHQEEDELEIAGEHLHSDQLVNCD
DTDGCTKELDSLDIKSETEGDDDAHSVDDESSEQSWALRSLSESTVACVTSDYAMQNVIL
QIGLRLLAPGGMQIRKLHRWVLRCHACCKVTQEVGKIFCPKCGNGGTLRKVSVTVGENGI
TMASRRPRVTLRGTKFSLPMPQGGRDAVTKNPILREDQLPQKVLHPKSKKPNKQEDDFLG
VDDIFTHSGEKKAQLKPPVRKALAMFSGKRNPNDNHFSRKKH
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgtggccgcctctcgcccccgccgccgccgacgatgcggcggatcacccgcct
cctcccgccgtcgcgagcggtgccggggcatggggggctgcggcggtggcgcagcgcaag
gccgtggtggaggactcggcagcgcaggcggtgagccggctcgtggcgagctgcgccaac
tccggcggcgtggccgtggccgtggtggacgccaacgccgccatcgcgggaggcgccgcg
ctctccaccacggcggggaggctggtgacggtgccggaggcgctcgaggaggtgcgcgac
gcggccgcgcggcggcggcttgcgctgctcccgacccccgtcgagaccgttgagcctgca
ccggagttcgtcaagaaagttaccaaatttgcccgagaaacaggagacctccaaacgctt
tcagatgttgatatcaagattattgctttggcttacatgttagaagctgagatccatggg
actagccatttgcgggagcaccctcctcctctgcgtgtggtgaatgtcagaaagttggaa
gaagctccactgcctggttggggctctaatgtgtcaaacctaaaggagtgggaagagttg
gatcagatgtctgaagcaggtggagatattaattctcgaatacttccactgaaagatctt
gagaatcaagatatccccactagtgagaccaacaatatttgtgaggcacaagaggattca
gaacatcagccttcaaagaaagatgaatgtgttgcatgggaagatgatgagaataacgaa
ggttggttacctgctgttagccgcagcacacacagaagatatttgcggaggaaggcaagg
cgtgatgccctcaaggactctgaacaaagtcttgagacaagttctgttgctccatcaatt
gatggtaataaatttctctctggaaatggtggaaatggacatgatgcgactccagcggat
ggcccttcttctgtcccaaagaaaatgaatccaagcactgatggtgtggaacatcaagaa
gaggatgaacttgaaattgctggagaacatttgcattctgatcaactagtcaattgtgac
gatactgatggatgcactaaagaattggatagcctagatataaaaagtgagactgaggga
gatgatgatgcacattctgtagatgatgagagcagtgagcagagttgggccctgagatcc
ttatctgaatcaactgtagcctgtgttactagtgactatgcaatgcaaaatgtcatcttg
cagattggcctccgtctcttggcaccagggggcatgcaaatacgcaagttgcataggtgg
gttttgaggtgtcatgcttgctgcaaggtgacccaagaggttggcaaaatattttgccca
aagtgtggcaatggtgggaccttacggaaggtttcagtaacggttggtgaaaatgggatc
actatggcttcacgacgcccacgtgttacacttcgcggcacaaaattttccttaccaatg
ccccaaggtggaagagatgctgtaactaagaaccccattctacgcgaggaccaacttcct
cagaaagttcttcatcctaaatcgaagaagcccaacaagcaggaggatgatttcttgggt
gtcgacgacatatttacgcacagtggtgagaagaaggcacagctgaaacctccggtgagg
aaggcacttgcaatgttcagtgggaaaagaaatccaaacgacaaccatttttctcgcaag
aagcactaa
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