Phragmites australis (common reed): 133918281
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Entry
133918281 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133918281 isoform X1
KO
K11097
small nuclear ribonucleoprotein E
Organism
paua Phragmites australis (common reed)
Pathway
paua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133918281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133918281
03041 Spliceosome [BR:
paua03041
]
133918281
03032 DNA replication proteins [BR:
paua03032
]
133918281
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
133918281
Spliceosome [BR:
paua03041
]
Complex A
U1 snRNP components
Sm proteins
133918281
U2 snRNP components
133918281
Complex B
U1 snRNP components
133918281
U4/U6.U5 tri-snRNP components
133918281
Complex C
U2 snRNP components
133918281
DNA replication proteins [BR:
paua03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
133918281
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
133918281
NCBI-ProteinID:
XP_062218057
LinkDB
All DBs
Position
5:complement(1467005..1470916)
Genome browser
AA seq
93 aa
AA seq
DB search
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEI
NVKKNTRKSLGLGWLCDSARYMCAFAPILHVST
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacgaaggtgcagaggatcatgactcagcccatcaacctcatcttccgcttc
ctccagagtaaagcacgcatccagatctggctcttcgagcagaaggacctgaggattgaa
ggcaggatcatcggctttgatgaatacatgaatttggtcttggatgatgctgaggagatc
aacgtcaagaaaaacaccaggaaatctctgggtttgggttggctttgcgattcagcaagg
tatatgtgtgcttttgctccaatccttcatgtttcgacttaa
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