Phragmites australis (common reed): 133918316
Help
Entry
133918316 CDS
T10575
Name
(RefSeq) proteasome subunit alpha type-1-like
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
paua Phragmites australis (common reed)
Pathway
paua03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
133918316
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paua01002
]
133918316
09182 Protein families: genetic information processing
03051 Proteasome [BR:
paua03051
]
133918316
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paua04147
]
133918316
Enzymes [BR:
paua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
133918316
Peptidases and inhibitors [BR:
paua01002
]
Threonine peptidases
Family T1: proteasome family
133918316
Proteasome [BR:
paua03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
133918316
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133918316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
133918316
NCBI-ProteinID:
XP_062218131
LinkDB
All DBs
Position
5:1816937..1821111
Genome browser
AA seq
268 aa
AA seq
DB search
MFRNQYDTDVTTWSPQGRLFQVEYAMEAVKQGAACVGLRSRTHAVVAAPNKAASELSSHQ
RKVFRVADHAGVALAGLTADGRVLSRFLRNECINHAFVYDAPLPVSRLALRLADKAQVCT
QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFKDYN
DYTPEQLIKDALSAIKETLQGEKLTGSNCTVAIVGRKEDGTIEPFEMIDAERIQEIIDSM
EAAEEAPAEQSSVQEEERGSDAAAPMDI
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggaatcagtacgacaccgacgtgacgacgtggagcccccaggggcggctcttc
caggtggagtacgccatggaggccgtcaagcagggcgccgcctgtgttggcctccgatcc
cgcacccacgccgtcgtcgccgctcccaacaaggctgcatccgagctctcctcccaccag
cgtaaggtcttccgcgtcgccgaccacgccggggtcgcgctggcggggctcaccgccgac
ggtcgcgtcctctcgcggttcctccgcaacgagtgcatcaaccacgccttcgtctacgac
gcgccgctcccagtctccaggcttgcgctccgactcgccgacaaggcgcaggtttgcaca
cagcggtcatggaagaggccttatggtgttggcctccttgttgccggactggacgagtct
ggagctcatctctactataactgtcccagcgggaactactttgagtaccaggcattcgct
attggttctcgatctcaagccgcaaagactttccttgagcgcagattcaaggactacaac
gactacaccccggagcaactcatcaaggatgccctctctgccataaaggagactctgcaa
ggcgagaagctgaccggttccaactgcactgtggccatcgtcggcaggaaggaagatggc
accatcgagccattcgagatgattgatgcggagagaatccaagaaataatagactccatg
gaggccgccgaggaggcgcccgcagagcagagctccgtgcaggaggaggaaaggggctcg
gatgctgctgcgcccatggacatctag
DBGET
integrated database retrieval system
