Phragmites australis (common reed): 133918517
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Entry
133918517 CDS
T10575
Name
(RefSeq) chaperone protein ClpB3, mitochondrial
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
paua03110
]
133918517
Chaperones and folding catalysts [BR:
paua03110
]
Heat shock proteins
HSP100
133918517
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_14
AAA_7
IstB_IS21
AAA_18
AAA_24
NBD_SMAX1
Torsin
NACHT
AAA_25
TraD
Motif
Other DBs
NCBI-GeneID:
133918517
NCBI-ProteinID:
XP_062218406
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All DBs
Position
5:4590619..4596193
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AA seq
982 aa
AA seq
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MARSAATRLARAARAAAAARRHAAGGGGRDVFPRALAPRAGDASAAAAARRPPWLAGVGR
FPVGGGLLVPPRRLFHSTTPARYSAAGTSSSSQIAPGEFTEMAWEGIVGAVDAARLSKQQ
IVESEHLMKALLEQKDGLARRIFSKAGIDNTSVLQATDEFISRQPKVSGDTSGPIIGSSF
VSILDNAKKHKKEYGDEFVSVEHILRAFTSDKRFGQQLFRDLNVGENDLKDAISAVRGSQ
RVTDQNPEGKYQALEKYGIDLTESARRGKLDPVIGRDDEVRRCIQILCRRTKNNPVIIGE
PGVGKTAIAEGLAQRIVRGDVPEPLMNRRLISLDMGALLAGAKYRGDFEERLKAVLKEVT
ASNGQIILFIDEIHTVVGAGATGGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDA
ALERRFQQVYCGEPAVEDTISILRGLRERYELHHGVKISDGALVAAAVLSDRYITGRFLP
DKAIDLVDEAAAKLKMEITSKPIELDEVDREIIRLEMEKLSLKNDTDKASKERLSKLEAE
LESLKQKQKDLSEHWEYEKSLMTRIRSIKEETDRVNLEIEAAEREYDLNRAAELKYGTLL
SLQKQLEEAENKLAEFQQSGKSMLREEVTDIDIAEIVSKWTGIPVSNLQQSEREKLLLLE
DVLHKRVIGQDIAVKSVANAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELGKTLAEFLF
NTENALIRIDMSEYMEKHAVSRLVGAPPGYVGYDEGGQLTETVRRRPYSVVLFDEIEKAH
HDVFNILLQLLDDGRITDSQGRTVSFTNCVIIMTSNIGSPLILDTLRNTTDSKEAVYEIM
KKQVVEMARQTFRPEFLNRIDEYIVFQPLDTGEINHIVEIQLNRVKNRLKQQKIQLQYTP
EAVKLLGSLGFDPNYGARPVKRVIQQMVENEIALGVLKGDFKEDDTVLLDVNSSAIAKGL
APQKKLVLQRLGNGNEELVAND
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgctccgccgcgaccaggctcgcgcgcgccgcccgcgccgctgccgccgctcgt
cgccacgctgccggaggcggcggacgcgatgttttcccgcgagccctcgcgccgcgcgcc
ggagatgcttccgccgccgccgcggcgaggaggccgccgtggctcgctggcgtcggtcgt
tttcccgtcggtggcgggctcctggtgccgccgcgccgcctgttccactccacgacaccg
gctcggtacagcgccgccggcacctcttcctcgtctcagatagcgccaggagaattcact
gagatggcctgggagggcattgttggtgcagttgatgcagcaaggttgtcgaaacaacag
atagtggaatcagagcacctgatgaaagctcttctcgaacaaaaggatggattagcacgt
agaatattttcgaaagctggaatagacaacacatcagtcctgcaagctactgatgaattt
atttctagacagccgaaggtctccggtgatacaagtgggccaattatagggtcaagtttc
gtatcgatcttggataatgcaaagaagcataaaaaagagtatggtgacgagtttgtctca
gttgagcatatactgcgagcattcacatcagataaaaggtttgggcagcagctgtttaga
gatctgaatgttggtgagaatgatctgaaagatgctatttcagctgtacgtggaagccaa
cgagtcacagatcagaatccggaagggaagtaccaagctctagagaagtatggtattgac
ttgacagaatcagctcggcgtggaaaacttgatcctgttattggtcgcgatgatgaagtg
cgcagatgcattcagatcctttgcaggagaactaaaaacaatcctgttattattggcgag
cctggagttggcaaaactgctattgctgaaggattggctcagcgtattgtgcggggagat
gttcctgaacctctaatgaatagaaggcttatttcattggatatgggagcactacttgct
ggggctaaataccggggtgattttgaggagagacttaaggctgttctgaaggaggtcact
gcttctaatggacaaatcatcttgtttattgatgagatccacactgttgttggtgcagga
gccaccggtggagcaatggatgccggtaacctgttgaaaccaatgcttggccgtggagaa
ctccgctgcattggagcaacaacattggatgagtacaggaagtacattgagaaggatgct
gctcttgagcgtagattccagcaggtttattgcggtgagccagcggttgaggatactatc
tccatactacgtggcttgcgagagcgatatgaactgcatcatggtgttaagatatcagat
ggagctcttgttgctgcagcagttttatcagatcgctacattactggacgctttttgcct
gacaaagccattgatctagttgatgaagcagctgctaagttaaaaatggagataacatcg
aagcctattgaattggatgaggtagatagagaaataataaggctagaaatggagaagctc
tcattgaagaatgatactgataaagcctccaaagaacggttgagcaagcttgaagctgaa
ctagaatctctcaagcagaagcagaaagacctttcagaacattgggaatatgagaagtcc
ttgatgacccgtataagatcaattaaagaagagactgacagagttaacctggagattgaa
gctgctgagagagaatatgatttgaaccgtgctgctgaactcaagtacggaacactttta
tctctacagaaacagctagaagaggctgagaataaacttgctgaattccagcaatcagga
aagtcaatgcttcgagaagaggtgactgacattgacattgctgagattgttagcaaatgg
actggtattccagtgtccaatcttcaacaatctgaaagggaaaagctgctgcttttggaa
gatgtactccacaagagggttatcggccaagatattgcagtcaagtcagtggccaatgct
atccgtcgttctagagcaggcctatcagaccctaaccgtccaatagcaagcttcatgttt
atgggcccaacaggtgtaggcaagaccgagctgggtaagacactggctgaattccttttc
aacaccgagaatgccctaatacggattgatatgagcgagtacatggaaaagcatgctgtc
tcccgcttggttggtgccccacctgggtatgtcggttacgatgaaggtggccaattaact
gaaactgttcgccggcggccttactcggtcgttctcttcgatgaaatagagaaggcgcac
catgatgtcttcaacatcttgttgcaactgttggacgatggaaggataactgattcacag
ggtaggacagtcagcttcactaactgtgtcatcatcatgacctcgaacattggttcacca
ttgattctagacacgcttagaaacacaacagatagtaaggaggcagtgtatgagataatg
aagaagcaggtggtcgagatggcccggcaaacattccgaccagagttcttgaacaggata
gatgaatacattgtgttccaaccactggacaccggagagataaaccacattgtggagatc
cagttgaaccgagtcaagaaccggttaaaacaacagaagattcaacttcagtatacacca
gaagctgtgaagcttcttggttctcttggctttgaccctaactacggtgctaggcctgtc
aagagggtgattcagcagatggtggagaacgagattgctcttggtgtcctgaagggtgat
ttcaaggaagacgataccgtcctcctggatgtgaattcttccgcgattgcaaaaggtctt
gctccacagaagaaactggtcctgcagaggttaggaaacggaaatgaagagttagttgcc
aatgactag
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