Phragmites australis (common reed): 133918542
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Entry
133918542 CDS
T10575
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
paua Phragmites australis (common reed)
Pathway
paua03015
mRNA surveillance pathway
paua04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133918542
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133918542
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
paua01009
]
133918542
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133918542
03036 Chromosome and associated proteins [BR:
paua03036
]
133918542
Protein phosphatases and associated proteins [BR:
paua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133918542
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133918542
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133918542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_1
RSA-1_C
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
133918542
NCBI-ProteinID:
XP_062218440
LinkDB
All DBs
Position
5:complement(5016228..5020393)
Genome browser
AA seq
545 aa
AA seq
DB search
MAGAGAADLSAAAHVSALPLQVDLMQLPPEVPAPGAPALRGVLDRLFAHWLSLPDTAALV
GNLVQKAKASGGGAAGGPGASMLPSMMLQGGAAVPPLSPRSPRLSRRPSGVGVVQPNRSA
SPLRPAAARAAKEVIPQFYFQDGRPPPYEVKKQCISTVDQLFAGHSNGLRAQEFRMVTRE
LCKLPTFFTTVMFEKIDKENTGFVTREAFIDFWVNSNLMSMDSAAQVFTILKQQNHNYLT
KEDFKPILKDLLDNHPGLEFLKSTPEFQERYAETVVYRIFYCLNQIGSGYLTLRELKRGN
LLSALRHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFFIDRENLIKYGNHALTYR
IVDRIFSEVPRKFTSKVEGKMGYEDFVHFILSEEDKSSGPSQEYWFKCIDLDGNGILTHN
ELQFFFQEQLHRMECMAQEPVLFEDILCQLIDMIGPEDDSFLTLKDFRRCTLSGHFFNIL
FNLNKFMVFEARDPFLIRQMREEPSLTDWDRFARREYVRLATEEDGEDASNASGDVWDES
LESPF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggcgggggcggcggatctgagcgcagcggcgcacgtgagcgcgctgccgctg
caggttgacctcatgcagctgccgccggaggtgcccgcgccgggggcgcccgcgctccgc
ggcgtcctcgaccgcctcttcgcgcactggctctcgctcccggacaccgccgcgctggtg
gggaaccttgtgcagaaggccaaggcgagcggcggcggtgcggcgggggggccgggggcc
tccatgctgccgtcgatgatgctgcaggggggcgccgccgtgcctccgctctccccgagg
tcgccgcggctctcgaggaggcccagcggggtcggagtcgtccagcccaaccgctctgcg
tcgccgctccgacccgccgcggcccgcgccgccaaggaggtcataccgcagttttatttt
caagatggccggccaccgccgtatgaggtgaagaagcagtgcatatcgacagttgatcag
ctcttcgccgggcattcgaatggtcttcgggctcaagaatttcggatggttaccagggaa
ctctgcaaactaccgacattctttaccactgttatgtttgaaaagattgataaggagaac
accggattcgtcacaagggaggccttcattgatttctgggtgaatagcaatttgatgagt
atggatagtgcagcccaagtattcacaattctgaagcaacagaatcacaattacctcaca
aaggaggattttaaaccgattcttaaagaccttttggacaaccatcctggcctggagttc
ttaaagagcacacctgaatttcaagaaagatatgctgagactgtcgtatataggatattc
tattgcttgaatcaaattggaagtggctatctaacacttagagagctgaagcgtggaaat
ctacttagtgctctcaggcatgctgatgaagaagaggatattaataaagttttaaggtat
ttctcgtatgagcatttctatgtgatatattgcaagttctgggagctggacacagaccac
gatttctttattgatagagaaaatcttattaagtatggaaaccatgcattgacatatagg
attgtagacagaattttctcagaggttcctaggaaatttaccagcaaggttgaagggaaa
atgggctatgaagatttcgttcattttatattgtctgaagaggacaaatcatctgggcca
agccaggaatattggttcaaatgtatagatttggatggcaatggcatactcacacacaat
gaactacagttcttttttcaagagcagcttcatcgcatggaatgcatggcccaggaacct
gttctatttgaggacatcttgtgtcagctcattgatatgattggacctgaggatgatagc
tttttgacattgaaagacttccgaaggtgcacactgtctgggcatttctttaacatcctc
tttaatctgaacaaatttatggtcttcgaagctagggatccattcctcatccgccaaatg
cgtgaagagccatcattaacagactgggatcgttttgcacgaagagagtatgtaagattg
gcgacggaagaagatggtgaagatgcttccaatgcaagtggagatgtttgggatgagtca
cttgaatctcctttctag
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