KEGG   Phragmites australis (common reed): 133918610
Entry
133918610         CDS       T10575                                 
Name
(RefSeq) coatomer subunit beta'-2-like
  KO
K17302  coatomer subunit beta'
Organism
paua  Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:paua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:paua04131]
    133918610
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:paua04147]
    133918610
Membrane trafficking [BR:paua04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    133918610
Exosome [BR:paua04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   133918610
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_SPT8 PEP5_VPS11_N NBCH_WD40 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_Vps41 WD40_like Beta-prop_WDR35_TULP_N TPR_12 PH_SPO71 TPR_8 HEAT_GCN1 Clathrin TPR_CcmH_CycH
Other DBs
NCBI-GeneID: 133918610
NCBI-ProteinID: XP_062218547
LinkDB
Position
5:complement(6628695..6638989)
AA seq 921 aa
MPLRLDIKRKLAQRSERVKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTDLPV
RSSKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVVVHPTQPFVLSSSDD
MLIKLWDWDKGWVCTQIFEGHSHYVMQVTLNPKDTNTFASASLDRTIKIWSLGSPDPNFT
LDGHSKGVNCLDYFTGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRMWHSTTYRLENTLNYGLERVWALGYMKGSRRIVIGYDEGTIMIKIG
REVPVASMDSSGKIIWAKHNEIQTVNIKTVGADNEIADGERLPLAVKELGSCDLYPQSLR
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSTDGEYAVRESTSRIKIYSKNFQ
EKKSIRPSFSTERIFGGVLLAMCTNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVTI
ASDTSFYILKYNRDVVSSHLDGGGSVGEEGVEDAFELLHEINERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTLFHLDRPMYLLGYLANQSRVYLIDKQFNVVGYTLLLSLIEYKTLVM
RGDFDRANSMLSSIPKEQYDSVARFLESRGMLEEALEIATDTNYRFDLAVQLGRLEIAKA
IATEVQSESKWKQLGELAMSTGKLEMAEECLLHAMDLSGLLLLYSSLGDAEGITRLASVA
KEQGKNNVSFLCFFMLGKLEECLQLLIESNRIPEAALMARSYLPSKVPEIVALWKKDLQK
INPKAAESLADPEEYPNLFPDWQIALNVEATVAPKRGIYPPAEEYMIHAERSNESLVEAF
KNTHVHEEVLPDDNEDTVHEVIEDSGVEESQEDAVEVYAEDDGVEESQDDAVEVEADGST
DGAVFVNGNSSEEQWVLTPEQ
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgccgctccggttggatataaagaggaagctcgcgcagaggtcggagagggtcaagtcc
gtggatctgcatccgacagagccatggattttgtcgagtctgtactcagggagcgtttgc
atctggaactatcagacgcagactatggtgaagtcatttgaagtcacggatttaccagtt
cgttcgtctaaatttattgctcgaaagcaatgggtcgttgctggcgccgacgatatgttc
atccgtgtgtacaattacaatacaatggataaggtcaaggtttttgaagctcatactgac
tacattaggtgtgtggttgttcatccaacccagccttttgttttgtcatcttccgatgac
atgcttattaagctatgggattgggacaaaggctgggtgtgtactcaaatctttgagggg
cattctcactatgtgatgcaagtcacacttaacccaaaagataccaatacttttgccagt
gcttcccttgatcgcacaattaagatatggagtcttggttctcctgaccctaacttcaca
ctagatggccattcaaaaggtgtgaactgtcttgattacttcactggtggtgatcggcca
tatttaattactggatctgatgatcagactgcaaaggtttgggactatcaaacaaagagc
tgtgttcaaacacttgaaggacacacacataatgtctctgctgtatgtttccatccggag
ctacctataataattactggctcagaggatgggacagttcgcatgtggcactctactacc
tacaggcttgagaacactcttaactatggccttgagcgagtttgggctttaggatacatg
aaggggtcaagaaggatcgtgattggatatgatgaagggacaataatgataaaaattggc
cgtgaagttcctgttgctagcatggacagcagtggaaagatcatatgggcaaagcataat
gaaatccaaactgttaatatcaagactgttggtgcagacaatgagatcgcagatggtgag
cgattaccattggctgtgaaggagctgggaagctgtgacctttacccacaaagcttaagg
cacaatccgaatgggagatttgttgttgtatgtggagatggagaatacataatatacaca
gcattagcatggagaaatagatcttttgggtctgcacttgaattcgtttggtcaactgat
ggggaatatgctgtcagagaaagcacctcgaggataaagatatacagtaaaaatttccag
gagaagaaaagcataaggccatcattttctacagaacgcatatttggtggagtattactg
gctatgtgtacaaatgacttcatttgcttctacgattgggcggaatgcaggttgatacgt
cgaattgatgtcaatgtgaagaatctctactgggccgacagtggtgatttagtaacaatt
gcaagtgatacatcgttctacattttgaagtataatagggatgtagtttcatctcatttg
gatggaggaggttcagttggtgaggaaggtgtggaagatgcctttgaactgcttcatgag
atcaatgaacgcgtccgaactgggctatgggttggtgattgtttcatctacaataattct
tcatggcggcttaattactgtgtaggaggagaggtcacaaccttgtttcacttggatcgg
ccaatgtatttattaggatatcttgcaaaccaaagccgtgtctatcttatcgataagcaa
tttaatgttgttgggtatactttactccttagtttgattgagtataaaacacttgtaatg
cgtggagattttgatcgtgcgaattctatgttatcatctataccgaaggagcaatacgac
agtgtggcacgtttcttggaatcacggggaatgttggaggaagcacttgagatagcaaca
gacactaactacagatttgatctggctgtgcagcttggtcgactcgaaattgcaaaggca
attgctactgaggtgcaaagtgagtccaagtggaagcagttaggggagttagctatgtca
actggaaagcttgagatggcagaggagtgtcttctacatgctatggacctcagtggttta
ttgcttctgtattcatcccttggggatgctgaagggattacaagattggcatctgtagct
aaagaacaaggaaagaacaatgtttctttcctttgtttcttcatgctaggaaaattggaa
gaatgccttcaactgttaatagaaagcaatcgtattcctgaagcagcattgatggcgaga
tcttatcttcctagcaaagtccctgagatagtagcattatggaaaaaggatctccaaaag
ataaacccaaaagcagcagagtcgttggccgatcctgaggagtacccaaacttatttcca
gactggcagattgctctcaatgtagaagctaccgtcgcccccaaaaggggtatctatcca
ccggctgaggagtacatgattcatgctgaaaggtcaaatgagagtctagtggaagctttc
aaaaatacacatgtacatgaagaggtgctaccagatgataacgaagacactgttcacgag
gtaatcgaggatagtggagtagaagagagtcaagaagatgctgttgaggtttatgctgag
gatgacggagtagaagagagtcaagacgatgctgttgaggttgaggctgatggttcaact
gatggtgctgtctttgtgaatggaaatagtagtgaggaacagtgggtactgactcctgag
cagtag

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