Phragmites australis (common reed): 133918615
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Entry
133918615 CDS
T10575
Name
(RefSeq) nuclear ribonuclease Z isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paua03016
]
133918615
Enzymes [BR:
paua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
133918615
Transfer RNA biogenesis [BR:
paua03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
133918615
Prokaryotic type
133918615
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
HapK
Monooxygenase_B
Motif
Other DBs
NCBI-GeneID:
133918615
NCBI-ProteinID:
XP_062218553
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All DBs
Position
5:6786066..6788346
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AA seq
303 aa
AA seq
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MAKRDEPASPNSPAAPTPAPSARPKAKPRLEIEGYPVEGVSIGGQETCVIFPTLSLAFDI
GRCPQRAVSQEFLFISHAHLDHIGGLPMYVATRGLYRMRPPTIFVPACLAELVARLFEVH
RAMDQSELAHKLVPLEVGDEYEFRRDLKVRAFRTYHVIPSQGYVIYTVKQKLKQEYLGLP
GSEIKRLKLSGVEITNTVTTPEIAFTGDTMSDFILDPGNADVLKARVLVVESTFLDDFIS
IEHAKEYGHTHLFEIVSQSDKLENKAILLIHFSARYTTEEIEAAINRLPTSFRRRVYALK
EGF
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggctaagagggacgagccggcgtccccgaactccccagctgctcccacccccgcgccg
tccgcgcggccaaaggcaaagccgcggctggagatcgagggttaccccgtggagggcgtc
tccatcggcgggcaggagacctgcgtcatcttccccaccctcagccttgccttcgacatc
ggccggtgcccgcagcgcgccgtctcgcaggagttcctattcatctcccacgcgcacctc
gaccacatcgggggcctacccatgtacgtggccacgcgggggctgtacaggatgcgcccg
cccaccatcttcgtcccggcgtgccttgcggagctcgtggcgcggctgttcgaggtgcac
cgcgccatggaccagtccgagctcgcgcacaagctcgtgccactcgaggtcggggatgag
tacgagttcaggagggacctcaaggtgagggcgttcaggacttaccacgtcatacccagc
caggggtatgtgatatacacggtgaagcaaaagctcaagcaggagtatcttggcctccct
gggagcgagatcaagaggctcaaattgtcaggtgtcgagatcacaaatacggtaacaaca
cctgagattgctttcacgggagacacaatgtcggattttatccttgatcctggaaatgcg
gatgtgttgaaagcaagagttcttgttgtggagagtacatttcttgatgacttcatttcg
attgagcatgcaaaagaatatgggcacacacacttgtttgagattgtgagtcaatctgac
aagcttgaaaacaaggctattctacttattcacttttcagctcgttatactacagaggaa
attgaagcagcaataaacaggttgccgacatcttttcgaagaagagtttatgcattgaag
gaaggcttctaa
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