Phragmites australis (common reed): 133918616
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Entry
133918616 CDS
T10575
Name
(RefSeq) farnesyl pyrophosphate synthase-like isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00900
Terpenoid backbone biosynthesis
paua01100
Metabolic pathways
paua01110
Biosynthesis of secondary metabolites
Module
paua_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
133918616
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
paua01006
]
133918616
Enzymes [BR:
paua01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
133918616
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
133918616
Prenyltransferases [BR:
paua01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
133918616
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
MKT1_N
TetR-C_39
Motif
Other DBs
NCBI-GeneID:
133918616
NCBI-ProteinID:
XP_062218559
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All DBs
Position
1:complement(39572795..39577004)
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AA seq
345 aa
AA seq
DB search
MAAPAASASAAFRRVYDTLKDELLRDPAFDFNDDAIRWLDGMLDYNVLGGNLNRGLAVIE
SYKLLKAGSEPSEEEVFLAYILGWGIEWLQAYFLILDDIMENSHTRRGKPCWYRLPKVGL
IAINDGLVLRSQISQIFRRYFFGKIYYVDLLDLFNEVEFKTTSGELLDQIITNEGRKDLN
KYTVHIYRRIVEYKTAYYSFYLPVACALLLSGQSLDDYVQVKKILVEMGVYFQIQDDYLD
CFGDPDVIDKIGTDIENFKCSWLFVQALQRADDKQKDVLFENYGKPDPACVAKVKALYKE
LALERVFSEYERESYEKLISDIEAQPSETVQAVLKSFLHRIYKRK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccgcggcgtcggcgtcggcggcgttccggcgggtgtacgacaccctcaag
gacgagctcctccgggaccccgccttcgacttcaacgacgacgccatccgatggctcgac
ggaatgttagactacaatgtgcttggcggaaatctaaaccgtggcctggctgttattgag
agctataaattattgaaagctggatctgaaccgagtgaggaggaagtgtttcttgcctac
atcctcggttggggtattgaatggcttcaggcctactttctaattcttgatgatattatg
gagaattctcatactaggcggggaaagccttgttggtatagacttccaaaggttggcctc
attgctataaatgatggacttgtcctccgtagccaaatttcacagatctttaggcgctat
tttttcgggaaaatttactatgttgatctactggacttattcaacgaggttgagtttaag
acaacttcaggagagttgctagatcaaattataacaaatgaagggcgcaaagatctgaac
aagtatactgtgcatatttaccggcgcattgtagaatacaagacagcatactattccttt
tatttgccggtcgcatgcgcactgctactgtctggtcagagtttggacgattacgttcaa
gtgaagaaaatcctggttgaaatgggtgtttacttccaaattcaggacgattacctggac
tgttttggtgatccagatgttatcgacaagattggaactgacattgaaaacttcaagtgc
tcttggctgtttgttcaagcacttcagcgtgctgatgataagcaaaaggatgtcttattt
gaaaattatgggaaaccagatcctgcatgtgtagcaaaagtgaaggctctgtataaagaa
cttgctcttgagcgggtcttctctgagtatgaaagggagagttacgaaaagctgatatca
gacattgaagcacaacccagtgaaacggtacaggcggtgttgaagtcctttctgcacagg
atctacaagaggaagtaa
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