Phragmites australis (common reed): 133918633
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Entry
133918633 CDS
T10575
Name
(RefSeq) ABC transporter B family member 9-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
paua Phragmites australis (common reed)
Pathway
paua02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133918633
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paua02000
]
133918633
04147 Exosome [BR:
paua04147
]
133918633
04090 CD molecules [BR:
paua04090
]
133918633
Enzymes [BR:
paua01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133918633
Transporters [BR:
paua02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133918633
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133918633
CD molecules [BR:
paua04090
]
Proteins
133918633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
AAA_16
Zeta_toxin
RsgA_GTPase
AAA_21
AAA_15
AAA_24
DUF87
AAA_30
AAA_23
YobI-ATPase
Motif
Other DBs
NCBI-GeneID:
133918633
NCBI-ProteinID:
XP_062218581
LinkDB
All DBs
Position
1:39592412..39608112
Genome browser
AA seq
1294 aa
AA seq
DB search
MGGAAARSEETETETEGRSNDGVAATKVPFLGMFRYAADRTDAALMVVGTAAAMANGMSE
PLMTVVFAAVIECFGAGEDSTVLHRVSKVVMYYIYLGIGTAVASFLQVSCWTVAGERQST
RLRSLYLEAVLRQDIEFFDVEMTTGEAASRMSADTVLIQDALGEKVGKYIQLLTTFVGGF
IIGFVRGWMLALVVLACMPPSILSFATVSRLRAQISGKRQASYSDAGNVVEQSIGAIRTV
VSFNGEKKAIAMYNTLIKRAYKATFMEGIITGLGIGCIFFVVFCSYSLAFWYGAKLIISK
GYTGGQVINVVFAILTGSMAIGNASPSISAIAEGQSAAQRLFEIINRKPKIGITDTSGIV
LEDIRGDVELKDVFFRYPARPEQLILDGLCLQVPSGTTMAIVGESGSGKSTVISLVERFY
DPQAGEVLVDGVNIKSLKLHWIRGKISLVSQEPLLFMTSIKDNIAYGKEDATLEEIKRAA
ELANAANFIENLPNAYETMVGQRGAQLSGGQKQRIAIARAILKNPKILLLDEATSALDVE
SERLVQEALNRIMVGRTTLVVAHRLSTIRNADCITVVHQGKVVEQGAHDELIKDPDGAYS
QLIRLQQAHTEEMHEAPNTVVSGSIYKSTSLSLEQSIARDSPRNRGQHSFAKSIGLSGSD
ELHRHVITDKKEHEESGDSKAPKKAPIGRLFKLNKPEAPILLLAVIAAFVHGLLFPSFSI
MMSGGIRTFYYPPHQLRKDSRFWALMCLLFAVIALVSVQLEYFLFGVAGGKLIERVRSLT
FQSLVHQEVAWFDDPSNSRFATRTILQIYLFIPTTVWTPSFLFHFYSGALSARLYIDALN
IRRLVGDNLSILVQCIVTLIAGFSIAFASDWKLTLIVICVIPLMGSQNYIQVKFLKGFSE
DAKVMYEDASQVVTEAIGSIRTVASFCAEKRVITSYSQKCQASMKQGIRSGMVGGLGFSF
SSLMLYLTYALCFYVGAQFVSEGKSTFNDVFRVFFALVFTAFGVSQTSAMASDSTKAQES
TASILAIIDRKSKIDSTSDEGMMLEKVDGIIDFKNVSFKYPSRPDVQVLRDFTLDIPARK
TVALVGESGSGKSTIISLLERFYDPDSGTISLDGAELKKLKLSWLRDQMGLVSQEPVLFN
DTIHANIAYGKQGEVSEDEIIAAAKAANCHEFISSLPQGYSTTVGERGTQLSGGQKQRVA
IARAILKDPKILLLDEATSALDAESERIVQDALDQVMVSRTTIVVAHRLSTIKGVDMIAV
VKDGKVVEKGKHESLMGIKGGVYASLVQLHLKSA
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggggggagcagcggcgaggagtgaggagacggagacggagacggaggggaggagcaac
gatggggtggcggcgacgaaggtgccgttcctgggcatgttcaggtacgccgccgaccgc
accgacgccgcgctgatggtggtcggaacggcggcggcgatggcgaacggcatgtcggag
ccgctcatgacggtcgtcttcgcggcggtcatcgagtgcttcggcgccggcgaggacagc
acggtcctccaccgtgtcagcaaggttgttatgtactacatctatctgggaatcggaaca
gcagttgcttcctttctccaggtgtcatgttggacagtggctggagaaaggcagtcgaca
cgcctgcgatctttataccttgaagctgttctcagacaagacattgaattctttgacgtg
gagatgacaactggggaagcagcttctagaatgtccgcagatactgtactgatccaagac
gccctcggtgagaaggtagggaagtacatacagcttttgacaaccttcgttggtggcttt
atcattggattcgtaagaggctggatgctggctctcgttgtgcttgcatgcatgcctcca
agcattctatcctttgcaactgtctcacgattgcgagctcaaatatctggcaagaggcaa
gcatcatatagcgatgcagggaatgttgtcgagcaaagcattggagcaataagaacagtt
gtttctttcaatggcgagaagaaagcaatcgcaatgtacaatactctcataaaaagggcg
tacaaggctactttcatggaagggatcatcactggtcttggaataggctgtatatttttt
gttgtattctgcagttactctctagccttttggtatggcgccaagttaatcatcagcaaa
ggatatactggagggcaggtcatcaatgtcgtatttgcaattttaactggttcaatggcc
ataggtaatgcatcaccatctatttctgcaattgcagaagggcaatctgcagcacagagg
ttgttcgaaattatcaacagaaaaccaaagattggcatcaccgacacttccggaatcgta
ttagaagatatcaggggagatgtcgaactcaaggatgtgttctttaggtatcctgcaagg
cctgaacagttgatacttgatggcttgtgtctacaagtacctagtggtactacaatggct
atagttggggagagtggaagcggaaaatcaacagtaattagtctggtggagagattttac
gacccacaagctggtgaagtgttggtagacggagtcaacatcaagagtttgaaactacac
tggattagaggaaagatcagccttgtcagccaagaaccgttgctttttatgacctccatc
aaagataacatagcctatggtaaagaggatgctacacttgaagagatcaagagagcagct
gagcttgcaaatgcagcaaacttcattgaaaatctgccaaatgcatatgagacaatggtt
ggtcaacgtggtgctcaactttctgggggccagaagcaaaggattgccatagcaagagca
atccttaaaaatccaaaaatccttctgttggatgaagctacaagtgctttggatgtagag
tctgagcggttagtgcaagaagcattaaataggatcatggtagggagaactacactcgtt
gttgctcaccgcctgagtaccatcaggaatgcagactgcataacagttgttcatcaaggg
aaagtagttgaacaaggtgcacatgacgagttgattaaggatcctgatggagcttattct
cagcttattcggctacaacaggcacataccgaggaaatgcatgaggctccaaatactgtg
gtgtcaggttcaatatataaaagtacaagtttgtctttggaacaatcaatagccagagat
tctcccaggaacagaggacaacattccttcgcaaaatccatcgggttgtctggatctgat
gaattgcacaggcatgttattacagacaaaaaggaacatgaagaatctggtgatagtaag
gctcctaagaaagcaccaatcggacgactatttaaacttaataagccggaagcaccaatc
ctcctattagctgttatagctgcctttgtgcatggtcttcttttcccatcattcagtata
atgatgtctggtggtataagaactttctactatccaccacaccaacttcgaaaagattct
agattttgggcattgatgtgccttctgtttgcagtaattgctctggtttcagtccaatta
gaatattttttatttggggtggctggtgggaaacttatagaacgtgtccgttctttgact
ttccaaagcttagtgcatcaagaagttgcttggtttgatgacccttcaaattccaggttt
gctactcgaactattttgcaaatttatttatttattcctacaactgtctggacaccaagt
ttcctttttcatttttacagtggggcacttagcgcaaggctctatattgatgctttgaac
atccgacgcctcgttggagataatttgtccatcctggtgcagtgtatagtaacacttatc
gctggcttttccatagcatttgcttctgactggaagctcacgctgatcgtcatatgtgtg
attcctttaatgggttcgcaaaattatattcaagtgaagttcttgaaagggttcagtgaa
gatgctaaggtgatgtatgaagatgcaagtcaagttgtaactgaagcaattggtagtatt
cggacagtagcatctttctgtgcggagaagagagtaattacatcatacagccaaaaatgc
caagcttcaatgaaacagggcattagaagcggaatggttggaggccttggtttcagtttc
tcgtccttaatgttgtatctcacgtatgctctttgtttctatgttggtgcgcagtttgta
tctgaaggcaaatccacctttaacgacgtttttagagttttctttgctttggttttcaca
gcgtttggagtttcccaaacaagtgcaatggcatcagattcaacaaaagctcaggaatcc
acagcttccatactagctatcatagacaggaagtctaaaattgactcaactagtgatgaa
ggcatgatgctagaaaaggttgatggcattatagattttaaaaatgtaagcttcaaatac
ccatcccgcccagatgtccaagtgctccgtgactttactttggacattccagccagaaag
actgttgcacttgttggagagagtggtagtggcaagtccacaataatttctttgctcgag
cgattctatgatccggattctggcacaatctcactagatggagcagaactcaaaaaacta
aaactgagttggttaagagaccaaatgggcttggtaagccaggaacctgtactctttaat
gacacaattcatgccaacatagcatacggaaaacaaggagaagtgagtgaggatgagatt
atcgctgctgccaaggcagccaactgtcatgagttcatatctagcttacctcagggatat
agcactaccgtaggtgagagaggaacacagctatctggtgggcaaaaacaacgggtagct
attgcaagggccatcctgaaggacccaaaaatacttctacttgacgaggcaacaagtgcc
ctggatgctgaatcagagcgtattgttcaagatgcgttggatcaagtgatggtcagcagg
accacgattgtcgtggctcaccgactgtccacaatcaaaggggtggatatgattgcagtt
gtcaaagatggtaaagtcgttgagaagggaaagcacgaatccctcatgggcatcaagggt
ggtgtttatgcatcgctggttcaactacacttgaagtcagcataa
DBGET
integrated database retrieval system
