Phragmites australis (common reed): 133918645
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Entry
133918645 CDS
T10575
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
paua Phragmites australis (common reed)
Pathway
paua02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133918645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paua02000
]
133918645
04147 Exosome [BR:
paua04147
]
133918645
04090 CD molecules [BR:
paua04090
]
133918645
Enzymes [BR:
paua01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133918645
Transporters [BR:
paua02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133918645
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133918645
CD molecules [BR:
paua04090
]
Proteins
133918645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
RsgA_GTPase
AAA_21
DUF87
AAA_24
Zeta_toxin
AAA_23
AAA_15
AAA_30
DLIC
Motif
Other DBs
NCBI-GeneID:
133918645
NCBI-ProteinID:
XP_062218601
LinkDB
All DBs
Position
1:complement(39612526..39618965)
Genome browser
AA seq
1264 aa
AA seq
DB search
MDATASRAAGRADDQNGHVDGEKEGAAKKVSLLGMFRYADRLDVLLMVIGTVGAVANGVA
EPLVTILFGNVIDSFGDSTTESILRSVTKVVLDFVYLGIGAAVVSFLQVSCWTMAGERQS
ARIRSLYLNAVLRQDIAFFDTELTTGQAVSRMSSDTLLIQDALGEKAGKLLQLSSAFVGG
FIIAFTRGWLLTLVMLTSLPLIAIAGAVSAQFLTKVSSKKLTSYGDAGDTVEQTIASIRT
VVSFNGENKAVAMYNNFIKKAYRTDIEEGITNGFGMGSVYCILFCSYGLAFWYGGKLIVG
KGYTGGKIITVLFAVLTGATSLGNATPSVSAIAEGQSAAYRLFETIERKPEIDSGDTSGV
ELDDIKGDVELKDVYFRYPARPDQLILDGLSLQVASGTTMAIVGESGSGKSTVISLVERF
YDPQAGDVLIDGINIKTLRLNWIRGKIGLVSQEPLLFMTSIKDNIMYGKEDATLEEIKRA
AELANAANFIDKLPNGYDTLVGQRGTQLSGGQKQRIAIARAILKDPKILLLDEATSALDV
ESERIVQEALNRIMVQRTTLVVAHRLSTVRNVDCITVVRQGKIVEQGPHDALVKDLNGAY
SQLIRLQETRADERRKIPDSGVPDSRSKSTSLSLRRSITKDSFGSNRYSFRNPLGLSVEL
HEDKITDGQRREELSDVVALKKAPIGRLFHLNMPEVSVLLLGSIAASVHGVIFPLFGIQM
SGVIKSFYEPPDKLQKDTSFWALISVVLGVAILISIPAEYFLFAIAGGKLIKRIRTLSFQ
SIVRQEVSWFDNPSNSSGALGTRLSIDASNVRRLVGDNLALIVQSVASLTTGFVIAFAAD
WRLALIITCVIPLVGAQGYAQVKFMKGFSEGAKEMYEDASQVATDAVGSIRTVASFCAEK
RVVTTYNEKCEALRKQGIRSGIVGGLGYGFSFLVLYLAYGLCFYVGAQFVRQGKTTFPDV
FRVFFALVLAAVGVSQASALASDATKARDSVSSIFSILDRKSKIDSSSDDGLALENVTGN
IDFNNVSFKYPSRPDVTIFSDFTLRIPSGKTVALVGESGSGKSTIIALLERFYDPDSGGI
SLDGVEIKSLKVSWLRDQMGLVGQEPVLFNDTIRANIAYGKHGEVTEEEVLAVAKAANAH
EFISSLPQGYDTMVGEKGIQLSGGQKQRVAIARAMVKDPKILLLDEATSALDAESERIVQ
DALDRVMVSRTTVVVAHRLSTIKGADMIAVLKEGKIAEKGRHEALMRIKDGAYASLVELR
SNSE
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgacggctagcagagccgctggccgcgccgacgatcagaacggacacgtcgat
ggcgagaaggagggggcggccaagaaggtgtcgctgctcggcatgttccggtacgccgat
cgcctggacgtgctgctgatggtgatcggcacggtgggggccgtggccaacggcgtggcg
gagcccctcgtgacgatcctcttcgggaacgtcatcgactccttcggggacagcaccaca
gagagcatcctccgcagcgtgaccaaggttgttctggatttcgtatatctgggcatcgga
gcagcagttgtatccttccttcaggtatcatgctggacaatggcaggagaaaggcagtca
gcccgcatacgttctttgtaccttaacgcagtcctgagacaagatattgcattcttcgat
acagagttgacaacaggccaagcagtttctcggatgtctagcgataccctcctgattcag
gatgctcttggcgagaaagcaggaaagcttctacaactctcatctgccttcgttggtggt
tttatcatagcattcacaagaggctggctcctaacccttgtcatgctaacatcactaccg
ctaattgctatcgccggtgcagtttctgcacagtttctaaccaaggtttctagcaagaaa
ctgacatcgtatggagatgctggggacactgttgagcagaccatcgcatctatacggaca
gtggtttccttcaacggcgagaacaaagctgttgcaatgtacaacaatttcataaagaag
gcgtacaggactgatattgaggaaggcattactaatggtttcggcatgggatctgtctat
tgcattttattctgcagctatggcctagccttctggtacggtggaaagctaatagttggc
aaaggatatactggtgggaagatcattacagttttgtttgctgtgttaaccggtgcaact
tctctaggcaatgcaacaccctctgtttcagcaattgcggagggtcaatctgcagcatac
agattgtttgaaacgattgagaggaaaccagagatagattcaggtgataccagcggcgtg
gagttagatgatatcaagggtgacgttgagctaaaagatgtttactttcgctaccctgca
agacctgatcaattgatattagatggattgtcattacaagtagccagtggaacaacaatg
gccatagttggagagagtggaagtggcaagtcaactgttatcagcctagttgaaagattc
tatgatccacaggctggtgatgttttaatagatggcattaacatcaagactcttaggctt
aattggataagagggaagataggtctggttagccaagaaccactgctctttatgacctcc
atcaaggataacattatgtatggtaaagaagatgccacacttgaagagatcaagagagca
gctgagcttgcaaacgcagcaaacttcattgataagttaccgaatggatatgatacattg
gttggccaacgtggtacacagctttctggaggacaaaaacaaaggattgcaattgcaaga
gccatcctcaaagatccaaaaatacttttgcttgatgaagcaacaagtgcattggatgtg
gaatctgagcggatagttcaggaggcactgaataggataatggtacaaaggaccactctt
gttgtcgctcatcgtttgagcactgtaaggaatgttgactgcataacagttgttcgtcaa
gggaagatagttgaacaaggtcctcatgatgcactagtgaaagatctcaatggtgcttac
tcccagcttattaggttacaagagactcgtgctgatgagaggcgtaaaataccagactct
ggggtgccagattccagatcaaaaagcactagtttgtcgcttagacggtcaataactaaa
gattcttttggtagcaacagatattccttcaggaaccccttaggattgtctgttgagtta
catgaggataagatcacagatggacagagaagagaagagctctccgatgttgtggccctt
aagaaagcaccaattggaagactttttcatcttaacatgccagaagtgtcagttcttctg
ttaggctctatagcagcatcagtgcatggagtcattttcccattgtttggtatacaaatg
tctggtgttataaaatcgttctacgaaccaccagataagctgcaaaaagacactagcttt
tgggcgctgatatctgttgttctgggggttgctattttgatttcaatcccagcagaatat
tttttgttcgcgattgctggtggcaagcttataaagcgtattcgtacgttatcatttcaa
agcattgtgcggcaagaagtttcttggtttgataatccgtcaaattccagtggggcactt
ggtacaaggctctcaattgatgcgtcaaatgtccggcgcttagtaggagataacttagcc
cttatagtgcagtctgtagcttcattaacaactggctttgtcatagcttttgcggcagac
tggaggcttgcactgatcatcacatgtgtgattcctttggtgggtgcacagggttatgct
caagtgaagttcatgaaggggtttagcgaaggtgctaaggagatgtatgaagatgcaagt
caagttgcaactgatgctgttggtagtatcagaactgtcgcatctttctgtgcagagaaa
agagtggtcacaacatacaacgagaaatgtgaagccctaaggaaacagggaattcgaagt
ggaattgttggaggacttggttatggtttctcattcttagttttgtatctcgcatacggc
ctttgtttctatgttggtgcacagtttgtacgtcaaggaaaaactacttttccagatgtt
tttagggttttctttgccttagttttggcagctgttggggtttcacaggcaagtgcactg
gcttctgatgcaactaaggcaagggattctgttagttccattttcagtattctagatcgg
aagtccaaaattgactcaagtagcgatgatggtctggcactggagaatgtcaccggcaac
attgatttcaacaatgttagtttcaagtacccgtcacgccctgatgtcacgatatttagc
gactttaccttgcgcattccttccggaaagacagtggcgcttgttggagagagcggtagt
ggcaagtccacaataattgctttactggagcgattctacgatcctgattctggtggaatc
tcactagatggagttgaaattaagagcttaaaagttagctggctaagggatcaaatgggg
ctggtaggccaggagccagtgcttttcaatgataccatccgtgccaacatagcatacggg
aaacatggagaggtaacagaggaagaggttctggccgtggccaaggcagccaacgcccat
gagttcatatcaagcttgccacaagggtatgacaccatggtcggcgagaaaggaattcag
ctgtctggcgggcagaaacaacgggtagccattgcaagggccatggtaaaggatcctaag
atactactccttgatgaggcaaccagtgccctggatgccgaatcggagcgcattgttcaa
gatgcactggatcgggtcatggtcagccgcaccaccgttgtggtggcgcaccgcctctcc
acaatcaaaggggctgatatgattgcagtcctcaaggaaggcaagattgcagagaaggga
aggcatgaagccctgatgcgcatcaaggatggagcctacgcctcactagtggagctccgc
tccaactccgaatag
DBGET
integrated database retrieval system
