Phragmites australis (common reed): 133918647
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Entry
133918647 CDS
T10575
Name
(RefSeq) ATP-dependent RNA helicase drs1-like
KO
K03257
translation initiation factor 4A
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133918647
03012 Translation factors [BR:
paua03012
]
133918647
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paua04147
]
133918647
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133918647
mRNA cycle factors
Stress granule specific factors
133918647
Translation factors [BR:
paua03012
]
Eukaryotic type
Initiation factors
eIF-4
133918647
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133918647
Exosomal proteins of bladder cancer cells
133918647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4283
Motif
Other DBs
NCBI-GeneID:
133918647
NCBI-ProteinID:
XP_062218602
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All DBs
Position
5:7577561..7585060
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AA seq
964 aa
AA seq
DB search
MGRPEGMHMVLERIEGHISHKSQEKKAAPEKELSTTLSDKKKCFACNERLHNLDQCKIKG
SFVTVAELFGHATRFPFYMIQPSEEVVAKEKFYHHCLLITSNISNLDLGRVKDELQKFWK
LSNDWELRRECRKNFIASFSSEDDLISCLKHPEMETSLDDKEMKFTVTRWKEGGEENIDL
IRQWFLVCGVPRIYRNWKELYQVASAFGVLVEVDEESLEVEDKEPIRLKIALRNLDGTPF
SYHFVFGWSSRMVTFTIEDKVKSIEQQRKELEEWNGKDRLDGFNKESEDKRNIAIGMPPG
SCHNTRIVASTGNHALDLEGCSNKVHKKELNTAQAGILLEEPKFIEELRFDREIKENKTN
APAVTTINSKKTTEKSSKAEVAHPIGGSSTNMIGEEHFRGIPKPPVIHVFKRRAKKQQGS
IEQKVNEALNNSSSKKLDKGMDPDSTSYATRIGALTGCDMLDFQSCSEKEHGKELNMAEK
AIAGERPKPVEEFGAYRENKDNNEAPDAATINSKKKQTTDDTSKTETTQLISGSSTFMIK
RIHKKGVDMDGVGPEGVQFHERQYASKVDARLAQNSKEFSAHNDICDSFSEMGLPENLLK
GIYAYGLEKASAIHQRGIVPLCKGLDVILQALSGTTVTLCCGVLQQLDYGSEECQALVLV
PTRDLAQETEKVIRALGKFLGVKAHACSGGTSIREDQQILSSGVQVIVGTPGRVLDMLQR
RALCPDHIRTFVLDEADELLTGGFKDQTCNVIQLLPPKIQVGLLSATFSNEALEFSRRFM
DKPVTIIVPRDEELRSISVKQLYVKVEKEEVKLGKVCDLFDTMAITQSVIFVNTRRKVKS
LIEKIKGKGYTVSASHGSMDQHARDTAIQEFQSGSSRILIATDLRGTDVVQVPVVINYDL
PTQPVKYIRRVQQGGQSGRKGVVISFVTRVDERILLDIQRFCNGQVGELPSDIADLLVGY
GVQN
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggggcgaccagagggcatgcacatggttttggaaaggattgaagggcatatttcacat
aagagccaagaaaagaaggctgcgccggaaaaagaactatcaactactttatcagataaa
aagaagtgctttgcttgtaatgagagattgcacaatttggatcaatgcaagataaaagga
agttttgttactgtggcagagctatttggccatgctacaagatttccattttacatgatt
caaccttcagaagaggtagttgcaaaagagaaattttaccatcactgcctgctgatcaca
tctaatatcagtaacttggacctgggtagagtgaaagatgaactacaaaaattttggaag
ctgtctaatgactgggaattaagaagagaatgcagaaagaatttcatagcatccttcagc
tcggaggatgacctaatcagctgtttaaagcatcccgaaatggaaacatcgctggatgat
aaggagatgaaattcactgtaacaaggtggaaggaaggtggtgaggaaaatattgacttg
attaggcaatggtttctagtgtgtggggtgccaagaatatacagaaactggaaggagtta
tatcaagttgcctctgcatttggagtgttggttgaggtggatgaggaaagtttggaagtt
gaggataaggagcctattaggttgaagatagcattaagaaatcttgatggaacccccttc
tcctatcactttgtgtttggatggtcttctagaatggtcacgttcacaatagaggacaaa
gtaaaaagtatagaacaacaaaggaaggaattagaagaatggaatggtaaagatcgtctt
gatggcttcaataaggaatctgaagacaaaaggaacatagctattgggatgcctccaggc
agctgccataacacaaggattgtagcttcaacaggcaaccatgcgttagacttggaaggt
tgctcgaacaaggtgcataaaaaggaactgaatacagcacaagcaggtatattgctggaa
gagccaaagtttattgaggagttaagatttgacagagagatcaaagaaaacaaaacaaat
gctccagcagtcactacgataaactccaagaaaacaactgaaaaaagttcaaaagctgaa
gtggcacaccccataggtggtagttcaacaaacatgattggagaagagcacttcagaggt
ataccaaagcctcctgtcatacatgtgttcaaaagaagagctaagaaacagcaaggatca
attgagcaaaaagttaatgaagcattaaacaacagctcatcaaagaaactggataaaggg
atggatccagatagcaccagttatgccacaaggattggagctttgacagggtgcgatatg
ttggatttccaaagttgttcagaaaaggaacatgggaaggaactgaatatggcagaaaaa
gctatagcaggggaaagaccaaagccggttgaagagtttggagcatatagggagaacaaa
gacaacaatgaggctccagatgctgctacaatcaactctaagaagaagcaaacaacagac
gacacgtcaaaaactgaaacaacacagttgatcagtggaagttcaacattcatgattaag
aggatacacaaaaaaggtgttgacatggatggagtgggacctgaaggagttcagttccat
gaaaggcaatatgcctctaaagtggatgcacggcttgctcaaaattccaaagaattcagc
gcacacaatgatatttgtgacagtttcagtgagatgggtcttccagaaaacctactgaag
ggaatatatgcttatggtctggagaaggcttctgcaatccatcaaagaggaattgttccc
ttatgtaagggtctggatgttatcctgcaggctttgtctggaacaactgttacactttgc
tgtggagttctgcagcaacttgactatggatctgaagaatgccaagctttggttcttgta
ccaacacgtgacttggcgcaggagaccgagaaagttattcgagcacttggtaagttcctt
ggtgttaaagcacatgcttgttctggaggcactagtatccgtgaggaccagcaaattctg
tcaagcggagttcaagtcatcgttggcactcctggtcgcgttcttgacatgcttcaaagg
cgagcactctgtccagatcacattagaacgtttgttttggatgaggcagatgaactactc
acaggaggtttcaaggaccagacttgtaatgttatccagcttctcccacccaaaatccag
gttggactcctctctgccaccttttccaatgaagcccttgagtttagccgcaggttcatg
gataagcctgtgacaattattgtgccaagagatgaagaactaaggagtatcagtgtcaag
cagttatatgtcaaagttgagaaggaagaagtgaagcttggtaaagtgtgtgatcttttt
gacactatggcaatcacacaaagcgtcatctttgtgaacacgcggcgcaaggtcaagtcg
ctcatagaaaagattaaaggcaagggttacactgtctcggcaagccatggcagcatggat
cagcacgccagggacactgccatccaggagttccaatccggatcatcccgtattctcatt
gccaccgaccttcgtggcactgatgtggtgcaggtccctgttgtcatcaactatgatctg
cccacacaaccagtgaaatacatccgtcgtgttcaacaaggtggacagtctggaaggaag
ggtgtggtcatcagtttcgtaactcgtgttgatgagcgcatcctccttgacatccagaga
ttttgcaatggccaggtaggcgagctaccttccgatatcgctgacctcttggtgggctat
ggtgtgcagaactga
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