Phragmites australis (common reed): 133918689
Help
Entry
133918689 CDS
T10575
Name
(RefSeq) heat stress transcription factor C-2a-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133918689
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
133918689
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
Motif
Other DBs
NCBI-GeneID:
133918689
NCBI-ProteinID:
XP_062218669
LinkDB
All DBs
Position
5:8853219..8854781
Genome browser
AA seq
268 aa
AA seq
DB search
MTSGGTMDAAAGVAPFVAKTYHMVDDPATDGVIAWGSDNNSFVVADPFAFSQTLLPAHFK
HSNFSSFVRQLNTYGFRKVDPDRWEFAHVSFLRGQTHLLHQIVRRISGAGKRKDDGGADA
VNGDDDSAVVMEVVQLKREQRAIEDRVAAMWRRVQETERRPEQMLAFLVKVAGDPQVLRR
LVAGGGEGDVGFAAGPDGGGEVKRARLLLDGDAAGRRADGFYVGGGDDGVNFAGFYNGVG
GFGGDVQVDGEGGYPPPPYEFPVDSSGY
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcggcggcaccatggacgcggcggcgggggtggcgccgttcgtggcgaagacg
taccatatggtggacgacccggcgacggacggcgtcatcgcgtggggcagcgacaacaac
agcttcgtcgtcgccgaccccttcgcgttctcgcagacgctgctgcccgcgcacttcaag
cactccaacttctccagcttcgtcaggcagctcaacacttacggtttccggaaggttgat
cctgacaggtgggagttcgcccacgtgtcgttcctgcgcgggcagacgcacctcctgcac
cagatcgtccgccggatcagcggcgccggaaagcgtaaggacgacggcggcgccgacgcc
gtgaacggcgatgatgacagcgcggtggtcatggaggtggtccagctgaagcgggagcag
agggccatcgaggaccgagtggcggcgatgtggcgccgcgtgcaggagacggagcgccgg
cccgagcagatgctcgcgttcctcgtcaaggtcgccggcgacccgcaggtgctgcgccgc
ctggtcgccggcggcggcgagggcgacgttggcttcgcagccgggccggacggcggcggg
gaggtcaagagggctcggctgcttctcgacggcgacgcggcggggaggcgcgccgacggg
ttctacgttggcggtggagatgacggcgtcaacttcgccgggttctacaacggagtgggc
gggttcggcggtgacgtgcaggtggacggcgagggcgggtacccgccgccgccctacgag
ttccccgtggacagcagcggctactga
DBGET
integrated database retrieval system
