Phragmites australis (common reed): 133918795
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Entry
133918795 CDS
T10575
Name
(RefSeq) F-box protein At3g58530
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133918795
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133918795
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GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_At5g56370
LRR_14
Spo16_C
LRR_NXF1-5
bPH_9
Motif
Other DBs
NCBI-GeneID:
133918795
NCBI-ProteinID:
XP_062218851
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All DBs
Position
5:12790239..12794103
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AA seq
347 aa
AA seq
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MAAADDVWCRETVPRVMELVSPRLPQRDACALLAVSPWCYRVLVANPKLWEVLDLREMKN
PGDRLISALSLVRYRHLKVLNLEFAQDIEDRHFIHLKEMSGISLEDLEFLNLNACQKISD
KGIEAVTSLCPNLRGLSIYWIVGLSDSSIGHITKNCKQILDLNLSGCKNISDKGMRLIAN
NYQGLKKLNITRCVKLTDDGFQEVLRKCSSLESLNLYALSSFTDKVYKEIGSLANLTFLD
LCGSQNLTDDGLACISRCGGLTYLNLTWCICVTDVGVVAIAQGCRSLELLSLFGIVGVTD
ACLEALSKSCSHSLTTLDVNGCIGIKRRSRDDLIKLFPLLSCFKVHS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgacgatgtgtggtgccgtgagacggtgccgcgagtgatggagctggtg
agcccgcggctgccgcagcgggacgcctgcgcgctgctcgctgtcagcccctggtgctac
cgcgtcctcgtcgccaaccccaagctctgggaggtacttgatctgcgtgagatgaagaat
cccggcgaccgacttatttcagcgctgtcactggtaaggtatcgccatctcaaagtacta
aaccttgagtttgcgcaagatattgaagaccgacattttattcatctaaaagaaatgagt
ggtatctcactggaagatttagaattcctgaacctaaacgcatgtcagaaaatctctgat
aaaggaattgaagctgttaccagtctttgtcctaatcttcgaggcctttctatctattgg
attgttggactgtcagactcaagcattgggcacatcacgaagaattgcaagcagatactg
gacctgaacttgagtggttgtaagaatatctcagataaaggtatgcggctaattgctaat
aattatcaaggactaaagaagttgaacataaccaggtgtgttaagttgacagacgatggg
tttcaagaagtgcttcggaaatgttcttctcttgagagcttgaacctttatgccctttcg
agttttaccgacaaggtttacaaggagattggatctttagctaatcttacatttctagac
ttatgtggttcccagaatctaaccgatgatggtcttgcttgtatatcaagatgtggaggt
ttgacatatctcaatttgacttggtgtatatgtgttactgatgttggggtcgtagctatt
gctcagggttgccggtcgcttgaactgctaagtttatttggaatagttggggtaactgat
gcctgcctggaggctttgtcaaaatcttgctcgcacagtctcacaactcttgatgtaaat
ggctgtattggtattaagaggaggagccgggatgacctgattaagctgttcccgctgttg
agttgcttcaaagtgcacagctag
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