Phragmites australis (common reed): 133918884
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Entry
133918884 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133918884 isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
paua Phragmites australis (common reed)
Pathway
paua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133918884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133918884
03012 Translation factors [BR:
paua03012
]
133918884
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
133918884
Translation factors [BR:
paua03012
]
Eukaryotic type
Release factors
133918884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
G-alpha
Motif
Other DBs
NCBI-GeneID:
133918884
NCBI-ProteinID:
XP_062218968
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Position
5:19079824..19099323
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AA seq
535 aa
AA seq
DB search
MEHDAEMAPPIASRAPAADADDWAERDDFEEPPVESYSQPLVAAAPEDDAREAPPAPAAQ
DVNRIQSGLQSLELQASDDGVQMEFEEQRNRKRHLNVVFIGHVDAGKSTAGGQILFLSGQ
VDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERSKGKTIEVGRAHFETETTRFTILDAP
GHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVLLAKTLGVTKLVVVIN
KMDDPTVEWSKDRYDEIEGKMTPFLKSSGYNVKKDVHYLPISGLLGTNMKTRMDKSTCSW
WSGPCFFEVLDSIEVPLRDPKGPVRMPIMDKYKDMGTVVMGKIESGTIKEGDNFVVMPNK
ANVKALSIYCDEDKVRSAAPGENVRVKLSGIEEEDITSGFVLSSVTNPVGAVSEFNAQLQ
ILELLDNAIFTAGYKAVLHIHSVVEECEIVELIEEIDLKRMKETDPKKKKPKRKPLFVKN
GAVVVCRIQVNNLICIENFSDFPQLGRFTLRTEGKTVAVGKVVAVPPSGSSTFKA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaacacgacgccgagatggcgccgccgatcgcctcccgcgcgcccgccgctgacgcg
gacgactgggcggagcgcgacgacttcgaggagcctccagtggagtcctactcgcaaccc
ctggtggctgcggcccccgaggacgacgctcgagaggcgcccccagctcctgcggcccag
gatgtcaaccgaattcaatcaggtcttcagtctctggagctgcaggctagtgatgatggg
gttcaaatggagtttgaggagcaacggaatagaaaacggcatttgaatgttgtgtttata
ggccatgttgatgcaggcaagtccacggctggaggccagatattgtttttaagtggacaa
gtggacgaacggacaatccagaaatacgagaaggaagcaaaggacaaaagcagagagagc
tggtacatggcgtacattatggacacaaatgaggaagaacggtcaaaggggaagactatt
gaagttgggagagctcactttgaaaccgaaacaacaagattcacaattttggatgcacca
ggtcataaaagttacgttccaaacatgataagtggtgcttctcaagccgacattggtgtt
ctggtgatatctgctcggaaaggtgaattcgaaactggatatgaaagaggagggcaaact
cgtgaacatgtcctgctggcaaaaactttgggtgttactaagttggttgtggtcataaat
aagatggatgaccctactgttgaatggtctaaagacagatatgatgaaatagaaggcaag
atgactcctttccttaagtcttcagggtacaatgttaagaaagatgtccactacttgcca
atttctggtctgttgggaactaatatgaagactcgcatggataaaagcacttgtagctgg
tggagtggtccgtgctttttcgaagttctggatagcatcgaagtccctttacgagatccc
aaaggcccagtaaggatgccaatcatggataaatataaagatatgggcaccgtggtgatg
ggcaaaatagagtcagggactattaaggagggcgataactttgtggtgatgccaaataag
gccaatgtgaaagcccttagcatatactgtgacgaggataaagtaagaagtgctgcacct
ggtgagaatgtccgtgtcaagttgtcaggaattgaagaggaggacatcacttctggtttt
gtgctatcaagtgttacaaatcctgttggtgctgtgtctgaatttaatgctcagcttcag
atactggagttacttgacaatgcaatcttcactgctggctacaaggcagtgttgcatatc
cactcagtagttgaggaatgtgagattgtagagctcatagaggaaattgacctcaagagg
atgaaagaaactgacccgaagaagaaaaagccaaagaggaagcctctttttgtgaagaat
ggagctgttgttgtttgccgcatccaggtcaataacttgatatgtatcgagaacttctct
gattttcctcagctcggaagatttacactccggacagaaggtaaaacagttgctgtagga
aaagttgttgctgttccgccgagtgggagctcaacatttaaagcttaa
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