Phragmites australis (common reed): 133918936
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Entry
133918936 CDS
T10575
Name
(RefSeq) vesicle transport v-SNARE 13-like
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
paua Phragmites australis (common reed)
Pathway
paua04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
133918936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133918936
Membrane trafficking [BR:
paua04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
133918936
BRITE hierarchy
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GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Flagellar_rod
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
133918936
NCBI-ProteinID:
XP_062219062
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Position
1:40374089..40378381
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AA seq
221 aa
AA seq
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MSEVFEGYERQYCEASASLSRKCTAASALDGEKKKQKLSEIQSGVEEAESLIRKMDLEAR
SLQPSVKAGLLAKLREYKSDLNNLKSELKRISAPNAKQTTREELLEAGMADTLAVSTDQR
GRLLMTTERLNQSTDRIKESRRTMLETEDLGVSILQDLHLQRQSLLHAHTTLHGVDDNIG
KSKKILAAMSKRMDRNKWIIGGIMATLVLAILIILYFKLTH
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggtgttcgagggctacgagcggcagtactgcgaggcctccgcctccctctcc
cgcaagtgcaccgccgcctccgccctcgatggagagaagaagaagcagaagctgtccgag
atccagtcgggcgtggaggaagctgaatcgctgattcgtaagatggacctggaggcgagg
agcttgcagcccagcgtgaaggcaggtttgcttgcaaagctgagggagtacaaatctgac
ctcaacaacctcaagagtgagctcaagaggatctcggcgccaaatgccaagcagactacc
agggaggagctccttgaggctggcatggctgacacgctcgcggtgtctactgatcagaga
ggaaggttgctgatgactacagaaagactgaatcagtccactgacagaattaaagagagc
cgaagaactatgttggagacagaagatcttggtgtgtcaattcttcaggaccttcaccta
caacgacagtcactgctacatgctcataccactttgcacggagtcgatgataacattggg
aagagcaaaaagatcttggcagcaatgtcaaagaggatggacaggaacaagtggataatt
gggggcatcatggcaactcttgttctggccattcttatcatactgtacttcaagctcact
cattaa
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