Phragmites australis (common reed): 133919041
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Entry
133919041 CDS
T10575
Name
(RefSeq) transcription factor E2FA-like isoform X1
KO
K06620
transcription factor E2F3
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133919041
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
133919041
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GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
TMF_DNA_bd
TrmB
ZapB
Motif
Other DBs
NCBI-GeneID:
133919041
NCBI-ProteinID:
XP_062219233
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Position
5:26574100..26584039
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AA seq
462 aa
AA seq
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MSGGSGRPPAAQKILQSLRPPLAFASPLRPTFAAPDDYHRFPAPAPAATSGGVGAGGGDI
EEGLVIRTPLKRKAASEENDAAESSECMITSPGFTGSPMLTPISGKAVKTSKSKAKNNKA
GPQTPTSNVGSPLNPPTPAGTCRYDSSLGLLTKKFINLLKQAQDGILDLNNAAEALEVQK
RRIYDITNVLEGIGLIEKTLKNRIRWKGLDDSGVELDNGISALQAEVENLSLQEQALDER
ISDMREKLRGLTEDENNQRWLYVTEDDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAGD
YLQRRYRIVLRSTMGPIDVYLVSQFDEKIEELGGVATSGRQANVPRNQPVEDFNTTNAGQ
SCTSMDVVQNVQHSQKTPLDPCALHEFGGMTRIIPSDVDTDADYWLLTEGDVSITDMWKT
EPEVQWDQIDFLSEEVGTPRAQNKQPLAVGAPQMQVLNMEKP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggggcagcggcaggccgccggccgcgcagaagatcctgcagtcgctgcgcccg
ccgctggccttcgcatcgccgttgcggccgaccttcgccgcacccgacgactaccaccgc
ttccccgcgccggcccccgccgctacatcaggcggcgtcggcgcggggggcggcgatatc
gaggaggggctggtcatccggacgccgctgaagagaaaagctgcatctgaagaaaatgat
gctgctgagtcaagtgaatgtatgattaccagccctggattcactggcagtccaatgctc
actccaatctctggaaaagctgtcaaaacctctaagtcaaaagctaagaacaataaggct
gggcctcagacgcctacgtcaaatgttggttcaccactcaatccaccaactcctgctggt
acttgccgctatgacagttcattaggacttctgacaaaaaagttcatcaacttgctcaag
caggctcaagatggtattctagatttgaataatgctgcagaagcactagaggttcaaaag
cggcgcatatatgacattactaatgtccttgaaggaattggactaatagaaaagacactt
aaaaacagaatccgttggaagggcctcgatgattcaggcgtggagttagataatggtatt
tctgctttgcaggcagaagttgaaaatcttagtttgcaggagcaagctttagatgagcgc
ataagtgatatgcgcgaaaaactaaggggactaactgaagatgaaaataatcaaaggtgg
ctctatgtgactgaagatgatatcaagggattaccctgctttcagaatgaaacactaatt
gcaataaaagcacctcatggtactacactcgaagttccggatccagatgaggctggcgat
tatctccagaggagatatagaatcgtgttaagaagtacaatgggcccaatagatgtttac
ttagtgagtcaatttgatgagaaaattgaggaattgggtggtgttgcaacatccggaagg
caagcaaatgtgcctagaaaccaacctgttgaagatttcaacacaacaaatgctggacaa
agttgcacatcaatggatgtggttcaaaatgttcagcacagccagaagactcccctagat
ccttgtgctttgcatgaatttggagggatgacaaggattattccttcagatgttgatacg
gacgcggattactggcttctaacagagggggatgttagcattactgatatgtggaaaaca
gaaccagaagtgcagtgggatcagattgattttttatccgaagaagttggcaccccgcgt
gcccaaaacaagcagccgcttgcagttggtgctccacagatgcaggttctaaacatggag
aaaccataa
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