KEGG   Phragmites australis (common reed): 133919094
Entry
133919094         CDS       T10575                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 16-like
  KO
K24273  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
Organism
paua  Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:paua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:paua03041]
    133919094
Spliceosome [BR:paua03041]
 Complex A
  U2 snRNP components
   U2 related factors
    133919094
 Complex B
    133919094
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4
Other DBs
NCBI-GeneID: 133919094
NCBI-ProteinID: XP_062219333
LinkDB
Position
5:28107618..28113209
AA seq 749 aa
MSAAAAAPGAISAAGTPAVATRREKQRERKKQRRRRARRDAAARARAAAEAEGADPEEEQ
RFRELKESEAAAESESARRAFEEAERRWLEAAAARAAEKAAAAAAEEEARAAESSSREKS
KYGHGNESEEDGEWEYVEDGPAEIIWQGNEIIVKKKKVKIPKGVKEKPPIQEEDRPTSNP
LPPQSVAFAAQRREPPLSAQEVLDKVAQETPNFGTEQDKAHCPFHLKTGACRFGVRCSRV
HFYPDKSCTLLMKNMYNGPGLALEQDEGLEFTDEEIEQSYEEFYEDVHTEFLKFGELVNF
KVCRNGSFHLRGNVYVHYKSLESALLAYNSINGRYFAGKQITCEFVALTRWKAAICGEYM
RSRYKTCSHGAACNFIHCFRNPGGDYEWSDWDNPPPKYWIRKMAALFGPSADTKASDTPD
FEWSQGSDRKRLKSSGDRYVSRRSRDEDVHKRHSSRDYSHSKEEHSSHSTKYEQSRHRRD
PYAAHKHRSREIEEHTGKYSSTMENERESHKHMHEERHRSDHDSGGKGDGDKIRSRRHKS
DQRGSLEPGSSDWHSDHTDTDISKNPSTSRYNNHKRSRRQSSEDPKLERHYSKLHKSMGK
EHSTERRSSHYIEDDYYAEKDGGRGKSRKDKDHPEDRWVATNSDVDSDVEGHQGSSSKRT
KLGGKDEAHSDAETQYQRSGCRTTKDGKSRRKRHSENRQHSDTEEDTSESDTRDSSSDAL
IRRSRSSDENVSKHRSRRKRKFQGRDTAE
NT seq 2250 nt   +upstreamnt  +downstreamnt
atgtcggcggcggcggcagcccccggtgccatcagcgccgccggtacaccggcggtggca
acgaggagggagaagcagcgggagcggaagaagcagcgccgccggagagcacggagggac
gccgcggcgcgcgcgcgggcggcggcagaggcggagggggccgaccccgaggaggagcaa
cgcttccgagagcttaaggagtcagaggccgccgccgagtccgagagcgcgcggcgcgcc
ttcgaggaggccgagcgacgatggctcgaggctgccgccgcgcgcgccgcggagaaggcc
gcggccgcagctgcggaagaggaggccagggctgcggagagttcgtctcgggagaagtct
aaatatggtcacggaaacgagtcagaagaagacggtgaatgggaatatgttgaagatgga
ccggcggagatcatatggcaaggaaatgagatcattgtgaagaagaaaaaggttaaaata
ccaaagggggtcaaggaaaaaccgccgattcaggaggaagatagacctacatcaaaccca
ctcccaccacaatctgtagcttttgctgctcagagaagagaacccccgttgtctgctcaa
gaagtactcgataaagttgctcaagagactccaaattttggaacagaacaggataaggcc
cattgcccatttcacctcaagacaggggcttgtcgctttggagtgcgctgcagcagggtt
catttttatcctgataaatcatgcacattgctaatgaaaaacatgtataatggtccaggc
cttgctttggagcaagatgaagggcttgagttcacagatgaagagatagaacaaagttac
gaagaattttatgaagatgtacatacagaatttctgaaatttggtgaactcgtcaacttc
aaggtatgtaggaatggatctttccatctccgaggaaatgtttatgtgcactataaatcc
ttggaatcagctcttcttgcctacaacagcatcaatggacgttattttgctggaaagcag
ataacatgtgaattcgttgctttgacaagatggaaggctgccatatgcggtgaatacatg
aggtcaagatacaagacatgttcacacggagctgcttgtaattttattcactgctttcgc
aaccctggaggagattatgagtggtctgattgggacaaccctcccccaaaatattggatt
aggaagatggctgctctttttggtccctcagctgataccaaggcgagtgataccccagat
tttgaatggtcacaaggttcagataggaagaggctgaaaagttctggtgataggtatgtt
tcaagaagatctagggacgaagatgtccacaaacgacactcttctcgtgattattcccat
tctaaggaagaacacagtagccacagcacaaagtatgagcaaagtcggcatagaagagat
ccatatgcagcgcataagcaccgaagccgagagattgaagaacatactggaaaatactct
tcgaccatggaaaatgaaagagagtcccataaacacatgcatgaagaaagacatagaagt
gatcatgacagtggaggaaaaggagatggtgacaaaattaggtctaggaggcacaaatct
gatcagcgaggaagtttggagcctggatcttctgattggcattcagaccacactgataca
gacatcagcaagaacccttccactagcaggtacaataatcacaaaaggagcaggaggcaa
tcctcggaggaccccaaacttgaaagacactattctaagttgcacaaatcaatgggaaaa
gagcacagcactgaaagacgctcgagtcattacatagaagatgattattatgccgagaaa
gatggtggaagaggcaaatctagaaaggataaagatcaccctgaagataggtgggtagcg
acaaatagtgatgtcgattcggatgttgagggacatcaggggtcaagcagtaaacgcacc
aagttgggagggaaggatgaggctcattctgatgcggaaactcagtatcagagatcaggt
tgtagaacaacgaaggacggcaagagtagaagaaagcgtcacagtgaaaacaggcagcac
agcgatactgaagaggatacttcagaatcagacactagagattcgagctctgatgcgttg
attcgtcgatcaagaagtagcgacgagaatgtctcaaagcacagatcaaggaggaagaga
aaattccagggtagagatacggcagagtag

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