KEGG   Phragmites australis (common reed): 133919137
Entry
133919137         CDS       T10575                                 
Name
(RefSeq) cryptochrome-1-like isoform X1
  KO
K12118  cryptochrome 1
Organism
paua  Phragmites australis (common reed)
Pathway
paua04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:paua00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    133919137
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase Cryptochrome_C
Other DBs
NCBI-GeneID: 133919137
NCBI-ProteinID: XP_062219397
LinkDB
Position
5:29185435..29189379
AA seq 705 aa
MSVSLSSMSGAGEAEVRTVVWFRRDLRVEDNPALAAAARTAGEVVPAYVWAPEEDGPYYP
GRVSRWWLSQSLKHLDASLRRLGAGRLVTRRSADTVVALLDLVRSTGATHLFFNHLYDPL
SLVRDHRVKELLTAEGITVQSFNADLLYEPWEVLDDDGCPFTMFAPFWNRCLCMPDPAAP
LLPPKRINSGDLTRCPSDELIFEDESERGSNALLARAWSPGWQNADKALTAFLNGPLIDY
AVNRNKADSASTSLLSPYLHFGELSVRKVFHQIRMKQLMWSNEGDHAGEESCTLFLRSIV
LREYSRYLTFNHPCSHEKPLLSHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATG
WLHDRIRIVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDTLGWQYISGSLPDGRELDR
IDNPQSEGYKFDLHGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGVELGSNYPRPVV
ELDAANCRLQDALSEMWELEAASRAAMENGMEEGLGDSSEVPPIAFPRELHMDVDREPVR
PAMQTPTMAGRRRQDQMVPSMTSSLVRAETELTADFGNYSEDSRPEVPSNVHLQPQTERE
ETVDGGSGTVRMNSIHQQHNLQNTLHRMRGGVPSTSEASSSCTGREGGVVPVWSPPAASV
HSDPYTADEADISSRNYLDRHQQSHRMMNWSQLSQSLTTEWEVDD
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgtcggtgtcgctgtcgtcgatgagcggcgccggggaggcggaggtgcgtaccgtggtg
tggttcaggcgggacctgcgggtggaggacaacccagcgctagcagcggcagcgcggacg
gcgggggaggtagtgccggcatacgtgtgggcgccggaggaggacgggccgtactacccc
ggcagggtgtcccggtggtggctcagccagagcctcaagcacctggacgcctcgctccgc
cgcctcggcgccggtaggcttgtcacccggcggtcggccgacaccgtcgtcgcgctgctc
gacctcgtccgcagcaccggcgccacgcacctcttcttcaaccacctctatgacccgctg
tcgctggtccgggaccaccgcgtgaaggagctgctaacagccgagggcatcaccgtgcag
tccttcaacgccgacctgctgtacgagccgtgggaggtccttgacgacgacggctgcccg
ttcaccatgttcgcgcccttctggaacaggtgcctatgcatgcccgatcccgccgcgccg
ctgcttccgcccaaaaggatcaattcaggtgacttgacgaggtgcccgtccgacgagctg
atcttcgaagacgagtcggagaggggaagcaatgcgctgctcgcgcgggcatggtcgccg
gggtggcagaacgctgacaaggcactgacagccttcctcaacggtccgctgatcgactac
gcagtgaaccgcaataaggccgacagtgcgagcacctccctgctctccccgtacctgcac
ttcggcgagctcagcgtgcgcaaggtcttccaccagatccggatgaagcagctgatgtgg
agcaacgaaggcgaccacgccggcgaggagagctgcaccctgttcctccggtccattgtc
ctgcgagagtactcaaggtacctcaccttcaaccacccctgcagtcacgagaagcccctc
ctgtcgcacctcaggttcttcccctgggttgtcaacgaggtgtacttcaaggtctggagg
caggggaggaccggctaccctcttgtcgacgctggtatgagggagctctgggcaactgga
tggctgcacgatcgcatacgcatcgtcgtctcgagcttctttgtcaaggtgctccagctg
ccatggcgctgggggatgaagtacttctgggacacattactggacgctgatctcgagagc
gacacattgggctggcagtacatttccgggtctctccctgatggccgtgagcttgaccgc
atcgacaaccctcagtctgaagggtacaagtttgacctgcacggggagtacgtccggcga
tggctgccggagctggcaaggctgccaacggaatggatacaccacccttgggatgcaccc
gagtcagtgctgcaggctgctggagttgagctaggctctaactaccctcgccctgttgtt
gagctagatgcagccaattgcaggttgcaagatgccttgtcagagatgtgggaacttgag
gcagcctctcgcgctgcgatggagaacggaatggaagaaggccttggcgactcctcagag
gtgccaccgatcgccttccctcgagaactgcatatggatgtcgaccgagaaccagtccgg
cctgctatgcagacaccaacaatggccggccggagacgacaagatcagatggtgcctagc
atgacttcctcattggtcagagctgaaacagaacttactgcagattttgggaactacagc
gaggacagtaggccagaagtcccatcaaacgtgcacttgcagcctcagacggagagggaa
gaaacggttgacggtggcagcggcactgtcagaatgaacagcattcatcagcagcataac
cttcagaacaccctacaccgtatgcggggtggtgtgccgtccacatcagaggcgtcgagc
agctgtacgggcagagaaggcggggttgtaccggtctggtcacctccggcggcatcagtc
cattccgatccttatactgccgatgaggctgacatttccagtagaaattatttggacagg
catcagcaatcgcataggatgatgaactggagtcaactctcgcaatcattgacaacggaa
tgggaagtggacgattaa

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