Phragmites australis (common reed): 133919137
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Entry
133919137 CDS
T10575
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12118
cryptochrome 1
Organism
paua Phragmites australis (common reed)
Pathway
paua04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
133919137
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
133919137
NCBI-ProteinID:
XP_062219397
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Position
5:29185435..29189379
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AA seq
705 aa
AA seq
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MSVSLSSMSGAGEAEVRTVVWFRRDLRVEDNPALAAAARTAGEVVPAYVWAPEEDGPYYP
GRVSRWWLSQSLKHLDASLRRLGAGRLVTRRSADTVVALLDLVRSTGATHLFFNHLYDPL
SLVRDHRVKELLTAEGITVQSFNADLLYEPWEVLDDDGCPFTMFAPFWNRCLCMPDPAAP
LLPPKRINSGDLTRCPSDELIFEDESERGSNALLARAWSPGWQNADKALTAFLNGPLIDY
AVNRNKADSASTSLLSPYLHFGELSVRKVFHQIRMKQLMWSNEGDHAGEESCTLFLRSIV
LREYSRYLTFNHPCSHEKPLLSHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATG
WLHDRIRIVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDTLGWQYISGSLPDGRELDR
IDNPQSEGYKFDLHGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGVELGSNYPRPVV
ELDAANCRLQDALSEMWELEAASRAAMENGMEEGLGDSSEVPPIAFPRELHMDVDREPVR
PAMQTPTMAGRRRQDQMVPSMTSSLVRAETELTADFGNYSEDSRPEVPSNVHLQPQTERE
ETVDGGSGTVRMNSIHQQHNLQNTLHRMRGGVPSTSEASSSCTGREGGVVPVWSPPAASV
HSDPYTADEADISSRNYLDRHQQSHRMMNWSQLSQSLTTEWEVDD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgtcgctgtcgtcgatgagcggcgccggggaggcggaggtgcgtaccgtggtg
tggttcaggcgggacctgcgggtggaggacaacccagcgctagcagcggcagcgcggacg
gcgggggaggtagtgccggcatacgtgtgggcgccggaggaggacgggccgtactacccc
ggcagggtgtcccggtggtggctcagccagagcctcaagcacctggacgcctcgctccgc
cgcctcggcgccggtaggcttgtcacccggcggtcggccgacaccgtcgtcgcgctgctc
gacctcgtccgcagcaccggcgccacgcacctcttcttcaaccacctctatgacccgctg
tcgctggtccgggaccaccgcgtgaaggagctgctaacagccgagggcatcaccgtgcag
tccttcaacgccgacctgctgtacgagccgtgggaggtccttgacgacgacggctgcccg
ttcaccatgttcgcgcccttctggaacaggtgcctatgcatgcccgatcccgccgcgccg
ctgcttccgcccaaaaggatcaattcaggtgacttgacgaggtgcccgtccgacgagctg
atcttcgaagacgagtcggagaggggaagcaatgcgctgctcgcgcgggcatggtcgccg
gggtggcagaacgctgacaaggcactgacagccttcctcaacggtccgctgatcgactac
gcagtgaaccgcaataaggccgacagtgcgagcacctccctgctctccccgtacctgcac
ttcggcgagctcagcgtgcgcaaggtcttccaccagatccggatgaagcagctgatgtgg
agcaacgaaggcgaccacgccggcgaggagagctgcaccctgttcctccggtccattgtc
ctgcgagagtactcaaggtacctcaccttcaaccacccctgcagtcacgagaagcccctc
ctgtcgcacctcaggttcttcccctgggttgtcaacgaggtgtacttcaaggtctggagg
caggggaggaccggctaccctcttgtcgacgctggtatgagggagctctgggcaactgga
tggctgcacgatcgcatacgcatcgtcgtctcgagcttctttgtcaaggtgctccagctg
ccatggcgctgggggatgaagtacttctgggacacattactggacgctgatctcgagagc
gacacattgggctggcagtacatttccgggtctctccctgatggccgtgagcttgaccgc
atcgacaaccctcagtctgaagggtacaagtttgacctgcacggggagtacgtccggcga
tggctgccggagctggcaaggctgccaacggaatggatacaccacccttgggatgcaccc
gagtcagtgctgcaggctgctggagttgagctaggctctaactaccctcgccctgttgtt
gagctagatgcagccaattgcaggttgcaagatgccttgtcagagatgtgggaacttgag
gcagcctctcgcgctgcgatggagaacggaatggaagaaggccttggcgactcctcagag
gtgccaccgatcgccttccctcgagaactgcatatggatgtcgaccgagaaccagtccgg
cctgctatgcagacaccaacaatggccggccggagacgacaagatcagatggtgcctagc
atgacttcctcattggtcagagctgaaacagaacttactgcagattttgggaactacagc
gaggacagtaggccagaagtcccatcaaacgtgcacttgcagcctcagacggagagggaa
gaaacggttgacggtggcagcggcactgtcagaatgaacagcattcatcagcagcataac
cttcagaacaccctacaccgtatgcggggtggtgtgccgtccacatcagaggcgtcgagc
agctgtacgggcagagaaggcggggttgtaccggtctggtcacctccggcggcatcagtc
cattccgatccttatactgccgatgaggctgacatttccagtagaaattatttggacagg
catcagcaatcgcataggatgatgaactggagtcaactctcgcaatcattgacaacggaa
tgggaagtggacgattaa
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