Phragmites australis (common reed): 133919328
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Entry
133919328 CDS
T10575
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
paua Phragmites australis (common reed)
Pathway
paua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133919328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133919328
03016 Transfer RNA biogenesis [BR:
paua03016
]
133919328
Enzymes [BR:
paua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
133919328
Messenger RNA biogenesis [BR:
paua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
133919328
Transfer RNA biogenesis [BR:
paua03016
]
Prokaryotic type
tRNA degradation factors
133919328
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
S1_RRP5
CvfB_2nd
KH_1
Motif
Other DBs
NCBI-GeneID:
133919328
NCBI-ProteinID:
XP_062219675
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All DBs
Position
5:complement(33331956..33339543)
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AA seq
981 aa
AA seq
DB search
MSMALASLRFLTRRRHRLRLPAPFAVPGDRAAFLSGAAEEEAAADAPRPPPQPGRKVLES
FREEFEIGGRTIAFETGKVARFANGSVVISMDDTHVLATVAAAKSSEPVRDFLPLTVDYQ
EKQYAQGVIPTTYMRREGAPKERELLCGRIIDRPIRPLFPPGFYHEVQIMVNVLSSDGKQ
DPDVMAANASSAALMLSDIPWNGPIGVIRVGRIDGNFVLNPTVDELGLSDLNLVYACSRD
ETLMIDVQAREITERDLKAGMKRAHSEAVQCIDPQIRLAKRAGKEKKEYKISLISDQSYE
KIRTLSEAPIEEVFTDSAYGKFERGEALEKITQSVKAKLEEENDEDSLKFLSKAVDTVRK
QVIRKRIIEKGLRVDGRQLDEVRPLYCESSAYPILHGSALFSRGDTQVLCTVTLGTPGDA
QRLDSIVGPPTKRFMLHYSFPPFSINEVAKRGGLNRREVGHGTLAEKALLAVLPPESDFP
YTVRVNSEVMASDGSTSMASVCGGSMALMDAGIPVREHVAGVSVGLVSQVDPTTGHISNY
RILTDILGLEDHLGDMDFKIAGTRKGITAIQLDIKPAGIPLHIICESLEPARKARNQILD
CMDQEISTARAINDGSAPRLATLSFSSDSLRKLLFHRKKIEQETGARVSVSDGTVTIVAK
TQPVMDKAIEKVEFLVGREIEVGRTYKGIVSSIKEYGAFVEFNGGQQGLLHISELSHEPV
SKVSDVVSVGQMLSLRCIGQDVRGNIKLSLKSTLPHLCNKKDLESKDSDPLPRQEVVGWA
AVENMPSVDAGAEPSSSKHEDGTAEEAPAFSTPSVIIRSAADCDAQDVANGRKKQTMVAK
SSPRPFKPASGRQEVRIATAKKASGASTPKKTKKVKAEKSGSNGLEASVSEVPEQDASNT
LDLEYSSPTKFRTGSMKLGDVVTAKVYQVRAYGLVLELSDGVRGMHKFEANGQKDFEIGQ
ELIAKCASFNAKGIPVFSLLD
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggcgctggcctccctccgcttcctcacgcgccggcgccaccgcctccgcctg
cccgcgccgttcgcggtacccggcgaccgcgcggcattcctctccggcgcggccgaggag
gaggccgctgcggacgcgccgcggccgccgccgcagccggggcggaaggtgctggagagc
ttccgcgaggagttcgagatcgggggtcgcaccatagccttcgagaccggcaaggtggcg
cgtttcgcgaacggctccgtggtgatctccatggacgacactcacgtcctcgccaccgtc
gccgccgccaagtcctccgagcccgtccgggacttcctcccattaactgttgattatcaa
gagaaacaatatgctcaaggtgttattcccacaacatatatgcgcagggaaggtgcccct
aaggaaagagaacttctgtgtgggcgtataattgatcgaccaataagaccattgtttcct
cctggattttaccatgaagttcagatcatggtaaatgttctttcctcagatggaaagcaa
gatccagatgtgatggctgcaaatgcctcttcagctgcactgatgctatctgatataccc
tggaatggtcccattggagtaatacgtgttgggagaattgatggaaactttgttttgaat
ccaacagtggatgagttaggtttgagtgatctcaatcttgtttatgcatgttcacgagat
gaaactttaatgatagacgtacaagctcgtgaaataactgaaagggatcttaaggcagga
atgaagcgtgcacattctgaggcagttcaatgtatcgaccctcaaatcagattggccaag
cgagctggcaaagagaagaaagaatacaagatatcactgatttcagatcaatcgtatgag
aaaattagaacattatcagaagcacccattgaggaagtcttcactgattcagcatatggc
aagtttgagcgaggagaagccttagaaaaaatcacacaatctgtgaaagcaaagcttgaa
gaagagaatgatgaggacagcctgaagtttctttccaaggcagttgacacagtgagaaaa
caggttatacgtaaaagaataattgagaagggacttagagtggatggtagacaacttgat
gaagtgaggccattgtattgcgaatccagcgcatatccaatattgcatggctctgccctg
ttttcgcgtggggatacgcaggttttatgtacagttacccttggtactcctggtgatgct
cagcgattggattcaattgttggccctccaacaaagcgtttcatgctccactatagcttt
ccaccattttcaataaatgaagttgctaaacgtgggggtttgaatcgacgggaagttgga
catggcactcttgcagagaaagcattgcttgctgtgcttcctccagaaagtgattttcct
tatactgttcgggtaaattcggaagtcatggcctctgatggttcaacatcaatggcatca
gtatgtggaggaagcatggctttaatggatgctgggatacctgtaagggaacatgttgct
ggtgtttcagtaggtcttgtcagtcaagtagacccaacgactggacatatttctaattat
cgcatattaacggatattttgggccttgaagatcacttgggtgacatggacttcaaaatt
gcaggaacaaggaaaggtattactgctattcagctggatataaaacctgctggaatacca
ttgcatataatatgtgaaagtttagagcctgcacgaaaggctcgaaatcaaatccttgac
tgcatggaccaggaaataagtactgcacgtgctattaatgatggaagtgcccctcgatta
gctacacttagcttcagcagtgattctcttaggaaattgcttttccacaggaaaaaaatt
gagcaagaaacaggtgcacgggtatcagtcagtgatggtacagtcactattgttgctaaa
acccaaccagttatggataaagctatcgagaaggttgaattccttgtgggccgtgaaatt
gaagttggccggacatacaaaggaattgtttcctcaatcaaggagtatggcgcttttgtg
gagttcaatggtggacaacaaggcctacttcatatttctgagttgtcacatgaaccggta
tcaaaagtctcagatgttgtatctgttggccaaatgctctctttgagatgtattggacag
gatgtgaggggtaacattaaactttcacttaaatcaaccttaccccatctgtgtaacaag
aaggatttggaaagtaaagattctgatcctttgccaagacaagaagttgttggttgggct
gctgtagagaacatgcccagcgtggatgctggtgctgagccatccagtagcaaacatgaa
gatggcactgctgaggaggcacctgcattttctactccttcagttataattcgaagcgct
gctgactgtgatgcccaagacgttgcgaatggtcgtaagaagcagacaatggttgcgaag
tcatctcctaggccatttaaaccagccagcggacgtcaggaggttaggatagctacagct
aagaaagcctcaggcgcatcaactcccaagaaaactaagaaggtaaaggctgagaaatct
gggagtaacgggctggaagctagtgtgtcagaggttccagaacaggatgctagcaacact
ctggacctggagtattcgagccccacaaagttccgaactgggtctatgaagttgggtgac
gtagttacagcaaaggtctaccaggtccgagcctatggactagtacttgagttgagtgat
ggagtgcgcggcatgcataaatttgaggcaaatggccaaaaggattttgagattgggcag
gaactgattgcgaaatgtgcaagtttcaacgcgaagggaattccggtcttctcattgctg
gactag
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