Phragmites australis (common reed): 133919341
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Entry
133919341 CDS
T10575
Name
(RefSeq) succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00020
Citrate cycle (TCA cycle)
paua00640
Propanoate metabolism
paua01100
Metabolic pathways
paua01110
Biosynthesis of secondary metabolites
paua01200
Carbon metabolism
Module
paua_M00009
Citrate cycle (TCA cycle, Krebs cycle)
paua_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
133919341
00640 Propanoate metabolism
133919341
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paua04147
]
133919341
Enzymes [BR:
paua01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
133919341
6.2.1.5 succinate---CoA ligase (ADP-forming)
133919341
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133919341
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
Succ_CoA_lig
Motif
Other DBs
NCBI-GeneID:
133919341
NCBI-ProteinID:
XP_062219691
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All DBs
Position
5:33632652..33642659
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AA seq
422 aa
AA seq
DB search
MVRGSLGKLASRAVSVAGRWQHQQLRRLNIHEYQGAELMGKYGINVPRGAAAGSVQEVQD
TLKNVFPSEKEIVVKSQILAGGRGLGTFKSGLKGGVHIVKAEEAEGIASKMLGQILVTKQ
TGPEGKIVSKVYLCEKLSLTNEMYFAITLDRKTAGPLIIACSKGGTSIEDLAEKYPDMII
KVPIDVFKGITDEDAAKVVDGLALKAADRQSSIEQIKKLYELFCKCDCTMLEINPLAETA
DNKLVAADAKLNFDDNAAFRQKEIFALRDTTQEDPREVAAAKADLNYIGLDGEIGCMVNG
AGLAMATMDIIKLHGGTPANFLDVGGSASEGQVVEAFKILTSDDRVKAIMVNIFGGIMKC
DVIASGIVNAAKQVDLKVPVVVRLEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKAS
VK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcgggtcgctcgggaagctggcgtcgcgcgccgtctccgtcgccgggagatgg
cagcaccagcagctccgccgcctcaacatccacgagtaccagggcgcggagttgatgggg
aagtacgggatcaacgtgcccaggggcgcggcggctgggtccgtgcaggaggtccaggac
accttgaagaacgtatttcccagcgagaaagagatagttgttaagagtcaaatccttgcc
ggtggccgaggactgggaactttcaaaagtggactgaaaggtggtgttcatattgttaag
gctgaggaagctgaaggaatcgcaagtaaaatgctaggccagattcttgtaacaaaacaa
actggtccagaggggaagattgtgagcaaggtctacttgtgtgagaaactgtcacttact
aatgagatgtactttgccattacccttgataggaaaactgctggtccgctcataattgct
tgcagcaagggaggaaccagtattgaagatcttgcagagaagtatcctgatatgattatt
aaggttcctattgatgtattcaagggaatcacagatgaggatgcagctaaagttgttgat
ggtctggccctaaaggcagcagacaggcagtcttctatagaacagattaagaagttgtac
gaacttttctgcaagtgtgattgcacaatgctggagataaaccctcttgcggagacagcg
gacaacaagcttgttgctgctgatgcaaagttgaactttgatgataatgctgcatttagg
cagaaagaaatctttgcgctgcgtgatacaacacaggaagaccccagggaggttgctgct
gccaaagcagatttgaactatattggtcttgatggagagattggttgcatggtgaacggg
gcaggattggctatggctacaatggacattatcaagttacatggtggtacacctgccaat
tttcttgatgttggtggaagtgcatcagaggggcaggttgtggaagcattcaagatactg
acttcagatgatagagtgaaggcaattatggtgaacatttttgggggcatcatgaaatgt
gatgtgatagcaagtgggattgtaaatgctgctaaacaggttgacctgaaggttcctgtt
gttgttcggttagaaggcaccaatgtagaccaaggaaagaggattcttaaggaaagtgga
atgacactgatcactgcggaggatcttgatgacgctgcagaaaaagctgtaaaagcatct
gtcaaataa
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