Phragmites australis (common reed): 133919416
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Entry
133919416 CDS
T10575
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
paua Phragmites australis (common reed)
Pathway
paua04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
133919416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133919416
03029 Mitochondrial biogenesis [BR:
paua03029
]
133919416
Membrane trafficking [BR:
paua04131
]
Autophagy
Autophagosome formation proteins
ULK complex
133919416
Atg1 complex
133919416
Mitochondrial biogenesis [BR:
paua03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
133919416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
133919416
NCBI-ProteinID:
XP_062219785
LinkDB
All DBs
Position
5:complement(35266520..35272249)
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AA seq
535 aa
AA seq
DB search
MASLPDSAGGGGRAGAELMVPQFLLKALHAILAVRAPRPHSSAPAAAAFRRRDRWFHLPL
HAPPPPPSAEHLPEPSPGEPLVVDVYLTPSGGGGAEEVVERWTVACEPWSSAAAAAAVGE
GLAVNRAYKRCITLLRSLYTALRFLPAYRVFRLLCASGQVYNYEMGHRVCSFAAPFSRAE
EAAMRTRPFGPVETKLGLLVVSVQYLPSLAGFNFEVSSLTSAAIIPDYVGSPAAEPMRAF
PASLTEAAGSAFPLPSRRPNSWASPAPWPHTPGQQAKFSPPPALYASPTPSPPTFAGGYL
HSRFSGETAPMSIPQVDDGRGPVHHRNMSEPIRAFMFPPPSPKSVRGDAGMQESPTETSR
SFRRAEGIRMGDLYANLPSGSKIKDSREESGRFSGIFSSSGSPRLGFSRSSSRLSMQDDT
DDADFPFAVDDVDPDSRPGSSGGKDVGDQVGSSSHKSQDAAVGYLVHLLKSARPLRDTSC
STHTSRAESTEAGSTSSFMSRRTSDAFEELESFKEIRENLLARSRSRLQDSLDKP
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcctgcctgactcggcgggcggcggggggcgcgcgggcgcggagctgatggtg
ccgcagttcctgctcaaggcgctccacgccatcctcgccgtgcgcgcgccgcgccctcat
tcttcggcgcccgcggcggcggctttccgcaggcgggacaggtggttccacctgccgctc
cacgcgccgccgccgccgccctcggcggagcacctgccggagccgtcccccggggagccg
ctcgtggtggacgtgtacctgaccccctcgggcggcgggggagcggaggaggtggttgag
cggtggacagtggcgtgcgagccctggtcctcagccgcggcggcggcggcggtaggggag
gggctggcggtcaacagggcgtacaagcgctgcatcacgctgctgaggtctctgtacacg
gcgctccgcttcctcccggcgtaccgcgtcttccgcctgctctgcgcgtccggccaggtg
tataactacgagatgggccaccgcgtctgctccttcgccgcgcccttttcccgcgcagag
gaggcggccatgcgcaccagacccttcggccccgtcgagaccaagctcggcctcctcgtc
gtctctgtccagtacctccctagcctcgccggcttcaatttcgaggtctcctccctcaca
tccgccgcgatcatcccggattacgtcggcagcccggcggccgagcctatgcgtgccttc
ccggcctcgctcacggaggcggccggctcggcctttccgctgccctcgcggcgcccgaac
agctgggcgtcgcctgcgccctggccgcacacgccggggcagcaggcgaagttctcaccg
ccgccggcactgtatgcatcgcctacgccctcgccgcccacgtttgccggtggctacctg
cactcgaggtttagcggcgagactgcgccaatgagcataccgcaggtggacgatggcagg
ggccctgtgcaccatcggaacatgtcggaacccattagagcgttcatgtttcctccacct
tccccgaagagtgtgcgaggggatgcagggatgcaggagtccccgacggagaccagccgg
tcgttcaggagggcggagggcatccggatgggcgatctctatgctaatttgccgtctggt
tccaagattaaggacagtagggaagaatctggcaggttctctggtatcttctcttctagt
ggttcaccacgacttggcttctcaagaagttcaagcagattgtctatgcaggatgatact
gatgatgcggattttccatttgctgtggatgatgttgatccagattcccgaccagggagt
agcggtgggaaggacgtgggggatcaggtaggttcgtcatcccataaatcacaagacgct
gctgttgggtatcttgtccacctgctgaagtctgcacgtcctctgcgagatactagctgc
tcaactcatacatcaagggctgaatctactgaagcaggaagcactagctctttcatgtcc
cgcaggacatctgatgcattcgaggagctcgaatctttcaaagaaataagggagaacctg
ctagcccgtagtagatctaggctgcaagattcattggataaaccctag
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