Phragmites australis (common reed): 133919454
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Entry
133919454 CDS
T10575
Name
(RefSeq) F-box protein At5g51370-like isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133919454
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133919454
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Paralog
GFIT
Motif
Pfam:
LRR_SKP2
LRR_FBXL15
LRR_RPS2
LRR_At5g56370
F-box-like
F-box_5
F-box
Motif
Other DBs
NCBI-GeneID:
133919454
NCBI-ProteinID:
XP_062219835
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All DBs
Position
5:complement(36255107..36260092)
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AA seq
500 aa
AA seq
DB search
MPEPDLHCLGGRGLGLHHHQRQQLKGWPDLWLVGDKPSPRARSAAMAPASPPPPPNQTLA
LSDGLLLRALACLPEPHLTGAASLVCRRWMRLAGRLRRRLAVRDWAFVTHRLPYRFPDLA
DLELFPASIAAPTALPHTSPLLTCGEVSLTLDPSADPPLGACRFLDDDVLDRGLTAVAAS
FPNLRRLSATAAAESGGLMAIACGCPTLQELELHRCTDLALRPVSAFAHLQILRIVAASP
ALYGTGEDGGVTDIGLTILAHGCKRLVKLELLGCEGSYDGIAAVGRCCAMLEELTIADHR
MDGGWLAALAFCGNLKTLRLQGCSRIDDDPGPAEHLGACLTLESLQLKRCQLRDHRGLRA
LFLVCEGAREIQVQNCWGLEDDMFALAGLCRRVKFLSLEGCSLLTTRCLESVITLWSDLQ
SLEVVSCSKIKDEEISPALSELFSNLKELKWRPDNKSLLAASLVGTRMGKKGRVFFKRKI
LPAHQRIKGKMLNHSTGAAA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcccgacctacactgcctcggcggccgcggcctcggcttgcaccaccaccag
cgccagcaactcaagggctggccggacctgtggctcgtgggggacaagcctagcccccgc
gcgcgctcggccgcgatggcgcccgcttcgccgccgccgccgcccaaccaaaccctagcg
ctctcggacgggctcctcctccgcgccctcgcctgcctcccggagccccacctcacgggc
gccgcgtcgctggtctgcaggcggtggatgcgcctcgcggggcgcctgcgccgccggctc
gccgtgcgggactgggcgttcgtcacgcatcgcctcccgtaccgcttccccgacctcgcg
gacctcgaactgttcccggcctcaatcgccgccccgaccgcgctgccccacacctcccct
ctcctcacctgcggcgaggtgtcgctaaccctagaccccagcgcggacccgccactcggc
gcctgccggttccttgacgacgacgtgctcgaccggggactcacggccgtcgccgccagc
ttccccaacctccgtcgcctctcggccaccgccgccgccgagtccggcgggctgatggct
atcgcctgtggctgcccgacgttgcaagagctagagctccaccggtgcaccgacctcgcc
ctccgcccggtctccgccttcgctcacctccagatcctccgcattgttgccgcgtccccc
gcgctctacggcaccggcgaggacggcggtgtcaccgacatcggcctcaccatcctcgcg
catggctgcaagcggttggtgaagctggagcttcttggttgcgaggggagctacgatggc
atcgcggctgtggggcgctgctgtgccatgcttgaggagctcaccatcgctgaccacagg
atggacggtgggtggcttgcggcgctcgctttctgtgggaacctcaagaccctgcggctg
caggggtgcagcaggattgacgatgatcctggcccggcagaacatcttggtgcttgcctc
acgctcgagagccttcagctgaagcggtgccagctgcgtgaccatcgcggcctccgcgcc
ctctttttggtctgtgagggtgcccgtgagatacaggtccagaattgctggggcctagaa
gatgacatgtttgccttggctggcctatgcaggagagtaaaattcctgtccttagaaggg
tgctcactattaacaactcgatgtctagaatcagtgatcaccttatggagtgatctgcag
agcctagaagtagtctcctgcagcaaaataaaggatgaggaaatcagccctgccctttca
gaacttttctccaatctcaaagagctgaagtggaggcctgacaacaagtcactccttgct
gcgagccttgtaggaaccagaatgggaaagaagggcagggtatttttcaaaaggaagatc
ttaccggcacaccaacggatcaaagggaagatgctgaaccattcaacaggtgctgctgct
tag
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