Phragmites australis (common reed): 133919490
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Entry
133919490 CDS
T10575
Name
(RefSeq) protein indeterminate-domain 6, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133919490
Transcription factors [BR:
paua03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133919490
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_4
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
133919490
NCBI-ProteinID:
XP_062219876
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Position
5:37232382..37242331
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AA seq
582 aa
AA seq
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MASNSSAAAVAALFGIRDGDHQDQIKPLLAQQQQQHQQPPAAPLNAASSSAGSSLQATAA
PPPVKKKRNLPDPDAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLK
QKDPAQMQRRRVYLCPEPTCAHHDPARALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQ
SDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARLPPTGLTASHLYGAT
SAANMALSLSQVGSHLASTLGADAHGHHQDLLLLGGGGAAIRGFDHLLGPSSASAFRSLT
PPAASAFLMGAPQDFGDGDGGNGSHRFLQGKPFNGLMHLPDLQGNGAGGPPASSAPGLFN
LGYIANSANSSGASSHGHASQGHMTIDQFSEGGGGGGGDSESSAAMLFGGGGNFAGGDHQ
VAPGGMYNEQAVMLPQMSATTLLQKASQMGSTTSAHGGAPVFGGLVGSSAPSAPHGRASM
VDQSQMHLRNLMNSLAGCGMFGGSNGGGMIDPRLYDMDHKVKFSQGRGDADMTRDFLGVG
GSGIMRGMPVARGEHHDGAADMSSLEAEMKSASSSFTGGRMQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaattcatcagcggcggccgtggcagcgttatttggaattagggatggcgac
caccaagaccagattaagccgctgcttgcacagcagcagcagcagcaccagcagcctcct
gcggcaccgctcaacgcggcttcttcttcggcggggtctagcctgcaggcgacagcggca
ccaccgccagtgaagaagaagagaaacctgccagaccctgacgctgaggtgatcgcactg
tcgcccaagacgctgctggcgacgaaccggttcgtgtgcgaggtgtgcaacaaggggttc
cagcgggagcagaacctgcagctgcaccgccgcgggcacaacctgccgtggaagctgaag
cagaaggacccggcgcagatgcagcgccggcgcgtgtacctctgcccggagccgacttgc
gcgcaccacgaccccgcccgcgccctcggcgatctgacagggatcaagaagcacttctgc
cgcaagcacggcgagaagaagtggaagtgcgacaagtgctccaagcgctacgccgtgcag
tcggactggaaggcgcactccaagatctgtggcacccgcgagtaccgctgcgactgcggc
accctcttctcgcggagggacagcttcatcacccacagggctttctgcgacgccctcgcc
caggagagtgcgcggctgccgcccaccggcctcactgccagccacctatacggcgccacc
agcgccgccaacatggcgctcagcctctcccaggtcggttcccacctcgcgtccactctc
ggcgcggacgcgcacggtcaccatcaggacctcctcctcctcggcggcggcggcgccgcg
atccgcgggttcgatcatcttctaggaccgtccagcgcctctgcgttcagatccctgacg
cctccagcagcgtcggcgttcctcatgggcgcgccgcaggactttggagacggcgacggc
ggtaatgggtcccaccggttcttgcagggcaagccgttcaacggactcatgcatctgccg
gatctccaaggcaacggcgccggggggccaccagcgtcgtcggctccgggtctcttcaac
cttggctacatcgcgaacagtgccaatagctcgggtgcatccagtcatggtcatgcaagc
cagggacacatgacaattgaccagttcagcgaaggaggaggtggcggcggcggcgactct
gagtcatcggctgcgatgcttttcggcggcggcgggaactttgccggtggtgaccaccaa
gttgctcctggtgggatgtacaatgaacaggccgtgatgctgccgcagatgtccgcgacg
acgctgctgcagaaggcgtcgcagatgggatccaccacgagcgcgcacggcggcgcgccc
gtgttcgggggcctcgtgggctcgtccgcgccctccgctccgcacggccgggcgtccatg
gtcgaccagagccagatgcacctgcggaacctgatgaactcgctggccggctgtggcatg
tttggcggctccaacggcggcggtatgattgacccgaggttgtatgacatggatcacaaa
gtgaagtttagccagggccgtggtgacgccgacatgacgcgggactttcttggcgtcggt
ggcagcggcatcatgagggggatgccggtggcgagaggggagcaccatgacggtgccgct
gacatgagctcgttggaggccgagatgaagtcggcctcgtcgtccttcactggaggcagg
atgcaataa
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