Phragmites australis (common reed): 133919557
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Entry
133919557 CDS
T10575
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 21-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paua01002
]
133919557
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133919557
Enzymes [BR:
paua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133919557
Peptidases and inhibitors [BR:
paua01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133919557
Ubiquitin system [BR:
paua04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133919557
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
133919557
NCBI-ProteinID:
XP_062219963
LinkDB
All DBs
Position
5:38853369..38859096
Genome browser
AA seq
746 aa
AA seq
DB search
MAEQDGAAGQSPPDSIPGIGAKNGEENCEQHQPYFSMCQPLRSVSYSNSWEGVCSPAANE
HDHNSGLNSMVDEHMLIASCSPGNKQPQSESIYDPVGGESKSCSPSLIDKEAGLVQDGMD
MEQSMDAIDVPNEETNQQPEPLSIEQPNSNQDDMGLRGVEANQQLLPLNSNQCNSNIGIE
PCDMEDKQFPFSFSYRRKPQSVGAGLSNMGNTCFLNATLQCITHTVPLVLKLRSTDHSTP
CSYNKDWFCSFCALKEHVDESIRRSGSVIMPAKFRDNLRKLSSDFRQGQQEDAHEFLRCL
LDNLHKCTLDPRSKGKGSSFDEESMVKQVFGGQLKSQLSCCECGHSSESFEPFLDLSLEI
DQVDHLVDALESFTKVEQIGDSEEKLTCESCNTQVCKNKQLTLDKAPDVIAFQLKRFTTL
DNFIEKIDKHVVYPPELDLKPFHSNPDTAGELKYDLYGVVEHSGLPNYGHYVCTIRSSPI
TWHLMNDSHVDSINDASALNQEAYILFYVRQGKFPWFLSLLEGKDVQHDETTRGASPVSV
LNTIDANCSTSSGEGNSNCSGDKSEKDETRHCKELEKDETSQYKSSFLPGEPSNRSPLGA
SNSNNIEDEINPCRVSLQDDASVRHLRTVETTNLDKPSTPCPKRLLSDNDLGLFDFEYFD
DEETPLLPDLKLKPKVRKAMSASASKATKGPSVDQNATRLMRGMPASRRKGFLDCMLTQQ
NAKQESRRCPASDPLDKKKRKLVLQY
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcaggacggcgccgcggggcagagcccgcccgactccattccggggatcggc
gctaaaaatggggaggagaattgtgagcagcatcaaccatatttttccatgtgccaaccg
cttcgctctgttagctattcaaattcgtgggaaggggtttgttctcctgctgccaatgaa
catgaccacaacagtggcttgaattcaatggttgatgaacacatgctgattgcatcttgt
tcccctggaaacaagcaacctcagtctgagagcatatatgatccagtcggtggggaaagc
aagtcatgctcaccatctttaattgacaaggaagccggtttggttcaagatggaatggac
atggaacaatcaatggatgccattgatgtgccaaatgaagaaacaaatcagcagccagaa
ccccttagcatagagcagcctaattcaaatcaagatgacatgggtttacggggtgtcgaa
gctaatcagcaattgttgccccttaacagcaaccagtgcaactccaatattggtattgaa
ccttgtgacatggaagataagcaatttcctttctcattttcttatagaaggaaaccccaa
tctgtgggagctggtcttagcaatatggggaacacatgcttcctaaatgcaactcttcag
tgcatcacacatacagtcccacttgttctcaagcttcgctcaactgatcattccactcca
tgctcatataacaaagattggttctgttctttctgtgcccttaaagaacatgttgatgaa
tcaattcgaaggtctggatctgttataatgccagcgaagttcagagataatttaagaaag
ttatcttcagattttagacaaggacagcaagaggatgcgcatgaattcctacgttgcttg
cttgataacttgcataagtgcacccttgatcccaggtcaaagggcaagggttcatctttt
gatgaagaaagtatggtcaagcaagtttttggaggccaactgaaaagtcagttgtcttgc
tgcgagtgtggtcacagctctgagtcatttgagccattcctggatctaagcttggagatt
gatcaggttgatcaccttgtagatgctttggaatcttttaccaaggtagagcagattggg
gactctgaagagaagctcacctgtgaaagttgcaacactcaggtttgtaagaataagcag
cttacacttgataaagcaccggatgtcattgcatttcaactcaagcgtttcaccaccctt
gacaacttcattgaaaagatcgacaaacatgtggtgtaccctccagagcttgatttgaag
ccgttccacagcaacccagacactgcgggggagctgaaatatgatctttatggtgttgtt
gagcattctggcttacctaactatggtcattatgtgtgcaccattcgttcttcaccaatc
acttggcacttgatgaatgactctcatgttgattctattaatgatgcaagtgcattaaac
caggaagcatatattctcttctatgttaggcagggcaaatttccgtggttcttgagtctg
ctagagggcaaggatgtccaacatgacgagactactcgtggtgcatctcctgtgtcagtt
ttgaatactatagatgcaaattgttcaacatcttccggagaaggaaatagcaattgttct
ggagataagtcagagaaagatgaaaccaggcattgcaaagagctagagaaagatgaaacc
agtcaatacaaatcatcattccttcctggggagccatctaatagaagtccgcttggtgct
tccaacagcaataatatagaagatgaaatcaatccatgcagagtatctctccaagatgat
gcctctgttagacatctccgtacagttgagactactaatctggataaaccctctactcca
tgccccaagcgactgttgtctgataatgatcttggcctgtttgactttgagtacttcgat
gatgaggagactcctttgcttccggatctgaaattgaaaccaaaggtgaggaaagctatg
tctgcatctgcatctaaagctacgaagggcccttccgttgatcagaatgcaacacgtttg
atgaggggcatgccagcctcacgaagaaaaggtttcctggactgcatgctcacacagcaa
aatgcaaagcaggagtctcgcagatgccccgcaagtgaccctctggacaaaaagaaaagg
aagttggttcttcaatactag
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