Phragmites australis (common reed): 133919588
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Entry
133919588 CDS
T10575
Name
(RefSeq) DNA topoisomerase 2-like
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paua03032
]
133919588
03036 Chromosome and associated proteins [BR:
paua03036
]
133919588
Enzymes [BR:
paua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
133919588
DNA replication proteins [BR:
paua03032
]
Eukaryotic type
DNA Topoisomerases
133919588
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
133919588
Centrosome formation proteins
Centriole proteins
133919588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
133919588
NCBI-ProteinID:
XP_062220005
LinkDB
All DBs
Position
5:complement(39221241..39228558)
Genome browser
AA seq
1496 aa
AA seq
DB search
MKGPLQSSSGHNAAAGGGDGKTIEEMYQKKTQLEHILLRPDTYIGSVEKHTQTLWVYEGG
AMAHRSVTYVPGLYKIFDEILVNAADNKQRDPKMDALRVDIDVAGCCISVYNNGDGIPVE
VHQEEGVYVPEMIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSMEFVIETADGRRQK
KYKQVFSENMGKKSEPQITKCKQTENWTKVTFKPDLAKFNMTHLEDDVVALMRKRVIDMA
GTLGKTVKVELDGQRVPAKSFSDYVNLYITSASIDRPEELPRIYEKVNDRWEVCVSLSEG
QFQQVSFVNRIATIRGGTHVDYVTNQIATHVMTIVNKKNKNANMKLHNVKSHLWVFVNAL
IDNPAFDSQTKETLTTRQGSFGSKCELSNDFLKKVEKSGVVSNLLSWADFKLSKELKKTD
GTKRSRISGIPKLEDANEAGGKDSDRCTLILTEGDSAKALAMSGIAEVGRDHYGVFPLRG
KLLNVREANHKQIMDNAEIQNIKQILGLQHGKQYDSTKGLRYGHLMIMTDQDHDGSHIKG
LLINFIHSFWPSLLKVPSFLVEFITPIIKATNTRNKTVLAFYTMPEYEAWKESLGGNAGV
WSVKYYKGLGTSTSKEGQQYFKDIAKHKKDFVWVDDQDGNDIELAFSKKRITDRKDWLTN
FQPGTYLDQRENQIKYRDFINKELILFSMADLQRSIPSMVDGFKPGQRKIMFCSFKRNFV
KEAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQSFVGSNNINLLHPQGQFGTRFQGGKD
AASPRYIFTKLSHITRSIFPKDDDILLNYLNEDGQSIEPTWYVPIIPVVLVNGSEGIGTG
WSTYIPNYNPRDIVANLRRLLNDECTEPMHPWYRGFKGSIEKTNTKAAGVTYTITGIIEA
VDNTTLRITELPVRRWTQDYKEFLASLAPEDKNKDKEIFIEDFTMQGDNEDVYFEVKLSE
ANMNIAKEEGLTKKFKLTTTIGTTNMHLFDADGKIQKYDNPEQILKAFFKLRLEFYDKRK
KALLENIKLDLKKLNNKVRFIRCVVEDEIEVKNRKRAELFVELQQKNFDPFPKKKKAAEP
AAVGATEEEDENEESSEAAKGIALASDYEYLLSMAIGTLTREKIQELNDEKAKLENEVEE
LRKTSPRSLWLRDLDAFEKELDVLDQMDEAEAEERKVRREEKANEEKGKKKGSKPGTKRQ
PKKTAAKPPKVESGTSDTPGNTAEQVVAKRGATWNKPTKKAHGAGSDDEDYGPENAKPGP
QKKKQSKKASAPASDDEEDDVPALKDRLAAFNIDDSSPDHSAMDTETTEGQQNENKGRKG
PSKRGASKKASSSLAVISSDDDDFDMEEVSEVQNLKKGRGRKPTAAEKPKAATTRKRAPA
QGKSMIQKVIQEEESNTSAPSPEKKVRKMRASPFNKKSSSVLQRGATASSTSSESTSETS
PSGSSAEPVAAPQPRRTARTTKKTTVYISESDDPEDEVVELTDDSDFDLDDNSDDE
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atgaagggccccctgcagtctagctccgggcacaacgccgccgccgggggaggcgacggc
aagaccatcgaggagatgtatcagaagaagacgcagctggagcacatcctcctgcggccg
gacacctacatcggctcggtggagaagcacacccagacgctctgggtctacgagggcggc
gccatggcgcaccgctcggtcacctacgtcccgggcctctacaagatcttcgacgagatc
ctcgtcaacgccgctgacaacaagcagcgcgaccccaagatggacgccctccgcgtcgac
atcgacgtcgccgggtgctgcatctccgtctacaacaatggcgacgggatccccgtcgag
gtccaccaggaggagggcgtctacgtgccggaaatgatcttcggccacctactcaccagc
agcaactacgatgacaacgtcaaaaagaccaccggcgggagaaacggctatggggccaag
ctcaccaatatcttctccatggagttcgtcatcgagaccgccgatgggcgccgccagaag
aagtacaagcaggttttctctgaaaacatggggaagaagtcagagccccagattaccaag
tgcaagcagacggagaactggaccaaggtcaccttcaagcctgatcttgccaagttcaac
atgacccatcttgaagacgatgttgtagccctcatgcggaagagagtgattgatatggcg
ggcactcttggcaaaaccgtgaaggttgagttggatggccagagggtgcctgcaaagagc
ttctcagattatgtgaacctgtatatcacgtctgcttccattgacagacctgaagaactc
ccaaggatttatgagaaagtaaatgatcggtgggaggtgtgtgtgagtctaagtgaaggg
cagtttcagcaggtcagcttcgtcaatagaattgcaaccataaggggtggaactcatgtt
gattatgtcaccaaccaaattgccacccatgtgatgaccattgtgaataagaaaaacaag
aatgcaaacatgaaactgcataatgtgaagagccatctatgggtctttgttaatgcactc
attgacaaccccgccttcgattcacagaccaaggagaccttgaccactcgtcagggaagc
tttgggtcaaagtgtgagctttctaatgatttcctcaagaaagttgagaaatctggtgtt
gtcagcaatctcctctcctgggctgatttcaaactaagcaaagaactaaagaagactgat
ggaaccaagaggtcaagaatttccggcattccaaaacttgaggacgcaaatgaagctggt
gggaaggactctgacaggtgcaccttgatcctgactgaaggagattcagcaaaagctctt
gctatgtctggcatagctgaagtagggagagatcactatggtgtgtttcctctcagggga
aaactattaaatgtgagagaagcaaaccataagcagataatggataatgcggaaattcag
aacataaaacaaatcctcggtttgcagcatgggaagcagtatgatagcacaaaaggcttg
agatatggccacctcatgataatgacagatcaggatcatgatggttctcacatcaaaggg
ttgttgatcaacttcattcattcattctggccatctcttcttaaagttccttctttcttg
gttgagttcatcactccgattataaaggcaaccaataccaggaacaaaactgtactcgcg
ttttacacaatgccagagtatgaagcatggaaagagagtttaggaggaaatgcaggtgta
tggtctgtaaagtactataaggggctgggaacaagcacatccaaagaaggtcagcagtac
tttaaagatatcgccaaacacaagaaggattttgtctgggtggatgaccaagatggtaat
gatattgagttagcattcagcaagaaaagaattactgataggaaagactggcttaccaac
tttcagcctggaacttaccttgaccaacgtgagaaccaaatcaagtatcgtgacttcatc
aacaaagagctgatactcttctcaatggcggatctgcagcgatcaataccttcaatggta
gatggctttaaaccaggtcagaggaagattatgttttgctcgttcaagaggaactttgtt
aaggaagctaaggtggcccagttctctggttatgtgtcagaacactcagcataccaccac
ggcgagcagagtttagcaagtacaattattggaatggctcaaagttttgttggtagcaat
aacataaaccttttgcaccctcaaggccagttcggtaccagatttcaggggggaaaagat
gctgcaagtcctaggtacatcttcaccaaactgtcccatatcactcgttcaattttccca
aaggatgatgacattcttcttaactacctaaacgaagatgggcagtcaattgaacccacc
tggtatgtgccaatcattcccgtggttttagtcaatggaagtgaaggaattggtactgga
tggagcacatatatcccaaactacaatccaagagacattgttgctaacctaagacggttg
ctgaatgatgagtgtaccgaaccaatgcatccatggtacagggggtttaagggctctatt
gagaagacaaatacaaaggcagctggtgtcacgtataccatcaccggtattatagaggct
gttgacaacactacactgaggattaccgagctgccggtccgccgctggactcaggactac
aaagaatttcttgcatctttggctccagaggataagaacaaggacaaggaaatatttatt
gaggatttcacgatgcaaggtgacaatgaggatgtttactttgaggtcaaattaagtgaa
gcaaatatgaatatagctaaggaagaaggactgacgaagaagttcaaattgacaactaca
attggaactacaaacatgcacttgtttgatgcagatggtaaaatacagaagtatgacaac
ccggagcagatacttaaagctttctttaaattgaggcttgaattctacgataaaagaaag
aaagcattattggaaaatataaagctggacctgaagaagcttaataacaaagttaggttt
atccgctgtgttgtcgaggatgaaatagaagtcaagaacaggaagagggcagagcttttt
gtggagctccagcagaagaattttgatcctttcccgaagaaaaagaaggcggccgagcca
gctgctgtaggagctacagaagaggaggatgaaaatgaagagagttctgaagctgcaaaa
ggaattgctcttgcaagcgactatgagtatctcctctcaatggcaattggcaccttgact
cgggagaagatacaggagctgaatgatgagaaggccaaattagagaatgaagttgaggaa
ctgaggaaaacatcaccaaggtcactttggttgagagaccttgacgcttttgagaaggag
ctggatgtgcttgatcaaatggatgaagcagaggcggaggaaaggaaggtgaggagggaa
gagaaagcgaatgaagagaagggcaaaaagaaaggatccaaaccaggaaccaagagacaa
cccaaaaagactgcagctaaacctccaaaggtggaaagtggcacaagtgatactccaggg
aatactgctgaacaagtggtggcaaagcgtggagctacatggaataaaccaaccaagaag
gcgcatggtgctgggtctgatgatgaagattatggaccagaaaatgcaaaacctggacca
caaaagaagaaacaatctaagaaagctagtgcaccggcaagtgatgacgaagaggacgac
gtgcccgcactaaaagatcgtcttgcagcttttaacattgatgactcctctccagatcat
tctgccatggatactgaaacaacagaagggcagcagaatgaaaacaaagggaggaaggga
ccaagcaaaagaggcgcatcaaagaaggcgtcgtcatccttagcggtgatatcttctgat
gacgacgattttgacatggaagaagtctcagaagtccaaaatctgaagaaaggtagagga
aggaagcccactgctgccgagaagccgaaggctgctaccaccaggaagagggcgccagct
cagggcaagtccatgatacagaaagtgatacaagaggaggagagcaacaccagcgctcct
tctcctgagaagaaggtacggaagatgagggcctcacccttcaacaagaagagcagctcg
gttttgcagagaggcgcaaccgcctcttcgacaagctctgaaagtacttctgagacttca
ccctctggcagctccgctgagccagttgctgcaccgcagccaagaaggacagctaggacg
accaagaagacaacagtctatatttctgagagcgatgaccccgaggatgaagtggtggag
ttaactgatgattccgacttcgacttggacgacaactctgacgacgagtga
DBGET
integrated database retrieval system