Phragmites australis (common reed): 133919611
Help
Entry
133919611 CDS
T10575
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
paua Phragmites australis (common reed)
Pathway
paua02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133919611
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paua02000
]
133919611
04147 Exosome [BR:
paua04147
]
133919611
04090 CD molecules [BR:
paua04090
]
133919611
Enzymes [BR:
paua01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133919611
Transporters [BR:
paua02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133919611
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133919611
CD molecules [BR:
paua04090
]
Proteins
133919611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
AAA_29
Zeta_toxin
AAA
ABC_ATPase
RsgA_GTPase
AAA_30
AAA_15
HUTI_composite_bact
Motif
Other DBs
NCBI-GeneID:
133919611
NCBI-ProteinID:
XP_062220039
LinkDB
All DBs
Position
1:complement(41464216..41472781)
Genome browser
AA seq
1229 aa
AA seq
DB search
MSVPSGTGGERPMSIRGMFRFADRVDVLLMALGTLGAIGDGCSTNLLLIFASDVMNALGY
GRAKVGSGATSVQFMHEVEKSCMNFVYLAFAVLAVAFMEGYCWSRTSERQVLRIRYLYLQ
AVLRQEVGFFDSQEATTSEIINSISKDASLIQEVLSEKVPLFLMHSTVFLSGLAFATYFS
WRLALVSFPLVLLLIIPGLIYGKYLLYLSRQSRHEYAKANSLVEQALGSIKTVYSFTAEK
RIIQRYTAILDKTIKLGIKQGIAKGLAVGFTGLSFAIWAFLAWYGGRLVMYHHESGGRIY
AAGISFVLGGLSLGMALPELKHFIEASVAATRILERTNRVPQINADDPKGLILDQIRGEL
EFESVRFVYPSRPNVPVLKQFNLQIPAGQTIALVGSSGSGKSTAIALVQRFYDASEGTVK
IDGFDIKELQLKWIRSKMGLVSQDHALFGTSIKENILFGKPDATMDEVYAAAMTANAHNF
IRGLPDEYETKIGERGALLSGGQKQRIAIARAIIKNPAILLLDEATSALDSESEKLVQHA
LDQASMGRTTLVVAHKLSTVKNADQIAVVDGGTIAEIGTHDELINKGGPYSRLVKLQKMV
SYIDQESEQFRASSVARTSTSRLSVSRASPTPLTPAISKENNSAVLPPAPSFSRLLAMNA
PEWRHAVVGSLSALVYGSLQPIYAITIGGMIAAFFVQDHNEMNAIIRRYALIFCSLSMVS
IVINLLQHYNFAYMGEHLVRRIRVQVLEKILTFEAAWFDEETNSSGSLCSRLSNEASLVK
TLVADRISLLLQTASGIIIAVTMGLMVAWKLALVMIAVQPSTMICYYAKKMVLSNVSRDL
AKAQHQSTQIAIEAVYNHRMVTSFGCSPKVLQLFEQAQEEPLKKARKKSWVAGLTTGLSP
CLSFLSWALDFWYGGKLAQSGEISAGDVFKTFFVLVSTGKLIADAGSMTSDVAKGANAVA
SVFEVLDRKSITPQNSKVEKGDQKKKIQGRIEFKKVDFAYPTRPECLILQDFSLDVKAGT
SVGLVGRSGCGKSTIIGLIQRFYDVDRGAVRIDGMDVREMDILWFRGFTALVSQEPAMFS
GSVRDNIAFGKPEADEDEIVEAAKAANAHEFISSLKDGYDTDCGEHGTQLSGGQKQRIAI
ARAIIRNPAILLLDEATSALDAQSEQVVQEALDRIMSGRTTIVVAHRLNTIKNVDSIAFL
GEGKVVERGTYPQLMNKKGAFYNLATLQK
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcccgtcgggcaccggcggcgagcggccgatgagcatccgcggcatgttcagg
ttcgcggaccgggtggacgtcctgctcatggccctgggcacgctcggtgccatcggcgac
gggtgctccaccaacctgctcctcatcttcgcgagcgacgtgatgaacgcgctcgggtac
gggcgcgccaaggtgggcagtggcgccacgagcgtgcagttcatgcacgaggttgagaag
tcgtgcatgaattttgtctacttggcgttcgcggtcttggcggtggcgttcatggaaggg
tattgctggagcaggacgagcgagcggcaggtgctgcggatccggtacctgtacctgcag
gcggtcctgcgacaggaggtggggttcttcgactcgcaggaggccaccacctcggagatc
atcaacagcatctccaaggacgcgtccctcatccaagaggtcctcagcgagaaggtccct
ctatttctgatgcactctacagtcttcctctccggactggcgtttgccacttatttctcc
tggaggctggctctggtttcctttcctctagtcctgcttctgataattccggggctcatc
tacggcaagtatcttctctacctttcccgccagtcgcgccatgagtatgccaaagcgaat
tccctggtcgagcaagcactgggctcgatcaagaccgtttactcgttcacagccgagaaa
aggatcattcagagatacacagcgatccttgacaagacgatcaaactggggatcaagcaa
gggattgcgaaaggtcttgctgttggattcaccggcctttcgttcgccatttgggccttc
ctcgcatggtatggcggcagattggtgatgtaccatcatgaaagtggaggaaggatatat
gctgcaggaatttccttcgtcttgggtggcctatcccttggaatggcactcccagagctg
aaacatttcattgaggcgtctgttgctgctacaagaattctcgaaaggacaaaccgtgtg
ccacagattaatgctgacgacccgaagggccttatcttggaccaaattcggggagagctt
gagtttgaatctgtccgttttgtgtacccatcaaggccaaatgtgccagtcctcaaacag
tttaacctccagattcctgctgggcagactattgctctggttgggtccagtggcagcggc
aagtcgaccgcgatagcattagtacagcggttttatgatgccagtgaaggaactgtcaag
attgacggtttcgacattaaggaactccaactaaagtggatcagaagtaaaatgggactc
gtcagccaagatcatgcattgtttggtacttcaataaaagagaacatcttgtttggcaaa
ccagatgcaaccatggatgaagtatatgcagcagccatgacagcaaatgctcacaacttc
ataagggggcttcccgatgaatatgagactaagattggcgagcgtggagcactgttatca
ggtggacaaaagcagcgtattgccattgcaagggcaattattaagaaccctgctatactt
ttacttgacgaagccacaagtgcacttgattcggaatcggagaagttggtgcagcatgca
cttgatcaagcatctatgggacgaacgacactggtagtagctcataagctctcaaccgtg
aagaatgccgatcagattgcagtagttgatgggggtacaatagccgaaattggtacacat
gatgaactgatcaacaagggtggcccatactcgagacttgtgaaattgcagaagatggtg
agctacatcgatcaagaaagtgaacaatttcgagcttcctcagtagccaggaccagtacc
agccgtctcagtgtgtctagagcaagtccaacgccacttacaccagctatctcaaaggaa
aataattctgctgttcttccacctgcaccatctttctccaggcttcttgcaatgaacgca
ccagagtggaggcatgcagtcgtaggcagtctgtctgcattggtatatggttccttgcag
cctatctatgcaataaccatcggaggcatgattgctgcattctttgttcaggaccacaat
gagatgaacgcaattatcagacgctatgccttgatcttctgctcattgtccatggtatcc
attgttattaatctattgcaacactacaattttgcgtacatgggggagcatcttgttagg
cgcatccgagtccaagtactcgaaaagatcttaacctttgaggcggcatggtttgatgaa
gaaactaattcaagcggttcattgtgctctcggctaagcaatgaggcttctcttgtcaaa
acccttgttgcggacagaatctccttactgcttcaaacggcatctggaattataattgca
gtgacaatgggcctgatggtagcttggaaacttgctcttgtcatgatagctgtacagcca
tctacaatgatatgctactatgccaaaaagatggttctctcgaatgtgtcaagggacttg
gcaaaggctcagcatcaaagtactcagattgccatagaagctgtttacaaccacaggatg
gtaacctcctttggatgctcacccaaggttcttcagctcttcgagcaagcacaagaggaa
ccattgaagaaagcaaggaagaagtcgtgggtagcagggctcaccacaggattgtcgcct
tgcctctcattcttatcatgggcactggacttctggtatggtgggaagctggcacagtct
ggggagatctcggcgggtgatgtcttcaaaacctttttcgtcctggtgagcacaggaaag
ctgattgctgatgctggtagcatgacatcagacgtggcaaagggagcaaatgcagttgct
tcagtgtttgaggtgctagataggaaatctatcactccacaaaattcaaaggtggaaaag
ggcgaccagaagaagaaaatacaaggaagaatagagttcaaaaaggtagattttgcatat
ccaacaagaccagaatgccttatcctacaggattttagcttggacgtgaaagcaggaacg
agtgtcggcctggttgggagaagtggttgtggtaaatctactatcataggcttgatccag
aggttctatgatgttgatagaggggctgtaaggattgatggtatggatgtgcgggagatg
gatattctttggtttcgaggatttacagctcttgttagtcaggagcctgcaatgttttca
ggcagtgtcagggacaacattgctttcggcaagccagaagctgatgaagatgagatcgtg
gaagctgctaaagcggcaaatgcacatgagttcatctcatctttgaaggatggatatgat
actgattgtggagagcatggtacacaactctcaggaggacaaaaacaaagaattgcaatt
gcaagagcaataatccggaatccagcaatactactacttgatgaagcaacaagtgctctt
gatgcacagtcagagcaagtggtgcaggaagctcttgatcgaataatgtcagggaggacc
acaatcgtggtggcacatcgactaaacacaatcaagaatgtagactcaattgctttcctg
ggagagggtaaggtggtggagcgtggcacttacccacagctcatgaacaagaagggcgca
ttctacaacctcgcaactcttcagaaataa
DBGET
integrated database retrieval system
